Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02249 ATGGCATCTTCTTCTAATTCTCCATGTGCAGCATGCAAGTTCCTAAGGAGAAAGTGTCAACCAGAGTGTGTATTTGCACCATACTTTCCACCAGATCAGCCTCATAAGTTCTCAAATGTTCATAGAATCTTTGGTGCTAGCAATGTCTCAAAGCTTCTCAATGATTTGCGCCCTCATCAACGTGAAGATGCTGTGAATTCCCTTGCTTATGAAGCTGAGATGCGTCTCCGTGACCCTGTTAATGGATGTGTAGGAGTCATTTCTCTCCTTCACCACCAACTCCGCCAGCTTCAAATGGATCTTTTATGTGCCAAATCTGAGCTCTCTAGGATCCAAAATTTTACCATGATAACAGGTAATGATCATGGTTTAATTACCGCTGCAGCCGGAGTTGCAGCGGTTACTACTACTGCCACTACCACCACTCATCATTGCATGACAAATATGAATGCTGTTGGTGGTAGCGGCGGTAGCCGTGATAATCACCATTATGATCATCATCAAAATTTTGCTAGGGATCATTACCAGCAGCAACAACATATAAATAGGAACTTTGACTCGGGGAACAACTATGATGATAATGTCTTGGCCAGGAACATTTCTTCAAGTTTTGGGCAACTAAATCAGCTTCAGCAGCCTAGTGCTGCTGGTGATGACAGTCACACTGTTCATCCCTCTTAG 681 0.4347 MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPHKFSNVHRIFGASNVSKLLNDLRPHQREDAVNSLAYEAEMRLRDPVNGCVGVISLLHHQLRQLQMDLLCAKSELSRIQNFTMITGNDHGLITAAAGVAAVTTTATTTTHHCMTNMNAVGGSGGSRDNHHYDHHQNFARDHYQQQQHINRNFDSGNNYDDNVLARNISSSFGQLNQLQQPSAAGDDSHTVHPS* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02249 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 174 - -
Rops7g02249 226 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Rops7g02249 226 Pfam Lateral organ boundaries (LOB) domain 8 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02249 Rops-Chr7 38734770 38735450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02249 2 226 AS2 family AT1G65620 57.269 2.16e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Rops7g02249 LOB 5.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02249 - - jre:109004073 290.812