Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02239 ATGGCATCCAGTTCAATGTCAGCCTCTGGCTCATGGAGTGCTAAGGACAACAAAGCCTTTGAAAGGGCTCTTGCTGTTTATGACAAGGACACCCCTGACCGTTGGTACAATGTTGCTAGGGCTGTTGGTGGGAAGACTCCAGAGGAAGTGAAAAGGCACTATGAACTCCTCCTCAGGGATGTTGGGTACATTGAATCAGGGCAAGTGCCATTCCCAAATTACAAGAAAAGTGGAGGGTCTAATGAAGAGAAAAGGCTGAAAAACCTGAAGCTCCAGTGA 279 0.4767 MASSSMSASGSWSAKDNKAFERALAVYDKDTPDRWYNVARAVGGKTPEEVKRHYELLLRDVGYIESGQVPFPNYKKSGGSNEEKRLKNLKLQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02239 92 CDD SANT 18 58 IPR001005 -
Rops7g02239 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Rops7g02239 92 Pfam Myb-like DNA-binding domain 10 55 IPR001005 -
Rops7g02239 92 SMART sant 8 60 IPR001005 -
Rops7g02239 92 SUPERFAMILY Homeodomain-like 5 59 IPR009057 -
Rops7g02239 92 Gene3D - 2 71 - -
Rops7g02239 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 85 IPR044636 GO:0003700
Rops7g02239 92 FunFam Transcription factor SRM1 4 71 - -
Rops7g02239 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Rops7g02239 92 MobiDBLite consensus disorder prediction 72 92 - -
Rops7g02239 92 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02239 Rops-Chr7 38468244 38469209 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops7g02239 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02239 - - gmx:100778660 157.918