Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02230 ATGATGCTGCGTGGATGGTCCTATGATGTATTCCTCAGTTTCAGAGGTGAAGATACAAGGAGAAGCTTCACAGGCTCTTTGTATCATGGTTTGCACCAAAGAGGTATCAATGTTTTCATAGATGATGATAAACTTAGAAGAGGGGAAGAGATATCTCAATCTCTTCTTAGAGCCATTGAAGAATCGAGGATTTCTATCATTGTGTTTTCTCAAAACTATGCATCTTCCACATGGTGTCTTGATGAGCTTGCTAAGATCCTTGAGTGTTTCAAAACAAGGGGGCAATTGGTTTGGCCAGTTTTCTATCATGTTGACCCTTCTGTGGTACGGCATCAGAGAGGAAGTTTTGGTAAAGCAATGGCTGAGCATGAAGTCAGATTCAAGGGTGATGTGGAAAGGTTGCAAAAGTGGAAACGAGCCTTGTTTGATGCAGCCAATTTGTCAGGTTGGAGCTTAGAAAATGGGTATGAGTTTGAGCTTATCCAAAGGATCATTGAGGAAGCCTCTAGTGATTCCTTCAAAAGGATGAGAAATCTTAAAATTCTTATAGTTCGAAATGGACACTTTATTGGAAGCCCTCAAAATCTTCCAAACAATTTAAGGTTGCTTGATTGGATGGGATACCCTTCATCATCTTTGCCATCTAGTTTTCAACCAAAGAAACTTGTTTTCCTCAACTTGTCACGTAGTCGCTTTACAATGCAAGAGCCATTCAAGTATTTGGATTCTTTGACTTCTATGGATTTGAGTCACTGTGAATTCTTGACAAAGCTACCTGACATTTCTGGAGTCCCAAATTTAACAGAACTAAATCTTGACTTTTGTACAAATCTAGAAGAGGTTCATGACTCTGTTGGATTCCTAGAGAAACTTGTTGAGTTGAGGGCTTATGGATGCACCAAGCTTAAGGTTTTTCCAAATGCCATCCGGTTGACATCATTGGAAAGTCTTTTTCTTAATTGGTGCTCAAGTCTTCAAAGTTTCCCAACTATTTTGGGGAAAATGTATAATCTCAGATCTATTTCTATTGAAGGAACTGGTATTGAAGAATTGCCTCCTTACATTGGAAATCTTGTTGGGCTTCAAGAATTAAGCATGACATCTTGCTTAAGTCTCAAGGAACTACCTGACAACATTGATATGTTGCAAAATCTTAGAAACCTTGATATGGAAGGCTGTCCATAA 1185 0.389 MMLRGWSYDVFLSFRGEDTRRSFTGSLYHGLHQRGINVFIDDDKLRRGEEISQSLLRAIEESRISIIVFSQNYASSTWCLDELAKILECFKTRGQLVWPVFYHVDPSVVRHQRGSFGKAMAEHEVRFKGDVERLQKWKRALFDAANLSGWSLENGYEFELIQRIIEEASSDSFKRMRNLKILIVRNGHFIGSPQNLPNNLRLLDWMGYPSSSLPSSFQPKKLVFLNLSRSRFTMQEPFKYLDSLTSMDLSHCEFLTKLPDISGVPNLTELNLDFCTNLEEVHDSVGFLEKLVELRAYGCTKLKVFPNAIRLTSLESLFLNWCSSLQSFPTILGKMYNLRSISIEGTGIEELPPYIGNLVGLQELSMTSCLSLKELPDNIDMLQNLRNLDMEGCP* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02230 394 Gene3D Ribonuclease Inhibitor 184 302 IPR032675 -
Rops7g02230 394 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Rops7g02230 394 SMART till_3 7 147 IPR000157 GO:0007165
Rops7g02230 394 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 170 IPR044974 GO:0006952
Rops7g02230 394 Gene3D - 3 177 IPR035897 -
Rops7g02230 394 ProSiteProfiles TIR domain profile. 6 172 IPR000157 GO:0007165
Rops7g02230 394 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 173 - -
Rops7g02230 394 Gene3D Ribonuclease Inhibitor 309 394 IPR032675 -
Rops7g02230 394 Pfam TIR domain 8 164 IPR000157 GO:0007165
Rops7g02230 394 SUPERFAMILY L domain-like 159 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02230 Rops-Chr7 38328171 38336714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02230 167 393 WRKY Transcription Factor Family AT4G12020 37.398 6.03e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02230 - - lja:Lj0g3v0128709.1 412.535