Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02223 ATGCCACAATCACCCTTTTTAACATTGGACATGTTGGATAAGTTGTTGAGCTTGGCACTTCCAATTGGGAGCAACAAGGACCACCCCATCACGTGCCCCATGGGCACAGCGGCGCCGCCACTTGATGGGCTGAAACTGCCACCGTTTCTTCTTTGCTTGGCGGAGTTGGACTTGGTTTGGGACACTGAGATGGAGTACTTTGAGGCCATGAAAAAGGCACGTAAAGATGTGGAATTGTTTGTTAGCAAGGGAATGATGCATAGTTTTTATCTTAATAAGATAGCTGTAGATGTGGACCCCACCACTGCTGCACAAACGGATGCTCTTATTAGTAGGGTCAAAGAGTTTATTGAGAAGCACTGA 363 0.4683 MPQSPFLTLDMLDKLLSLALPIGSNKDHPITCPMGTAAPPLDGLKLPPFLLCLAELDLVWDTEMEYFEAMKKARKDVELFVSKGMMHSFYLNKIAVDVDPTTAAQTDALISRVKEFIEKH* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02223 120 Pfam alpha/beta hydrolase fold 3 90 IPR013094 GO:0016787
Rops7g02223 120 Gene3D alpha/beta hydrolase 1 119 IPR029058 -
Rops7g02223 120 SUPERFAMILY alpha/beta-Hydrolases 4 119 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02223 Rops-Chr7 38270535 38271861 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02223 3 118 Carbohydrate Esterase AT5G16080 30.172 3.52e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02223 - - lja:Lj0g3v0229819.1 209.92