Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02220 ATGGCCACACAAAAGCTTAGATTTGGAGCAAAATTCCTTGAGAACTCTAAACATTATTTTGCTATGATCGCTATACAATTTGGCTTTGCAGGCATGAACATTATCACTAAGGTTTCACTCAGCCGAGGCATGAGCCACTATGTCTTAGTTGTGTATCGCCATGCCATTGCAACTGCTGCCATTGCTCCATTTGCCTTCATCTTTGAAAGGAAGGCTCAACCAAAGATAACATTCCCAATTTTCATACAAATTTTCATCCTAGCTCTCCTTGGGCCAGTGATAGATCAAAACTTCTACTATGCTGGGTTGAAATTCACATCCCCAACCTTCTCATGTGCATTGAGTAACGTGCTTCCTGCCATGACTTTTGTGATGGCAGTTTTATGCAGGATGGAAAAGATCAACATGAAGAAGGTGAGATGCCAAGCAAAGGTAGTGGGAACCATAGTAACTGTTGCAGGTGCCATGTTGATGACCATATATAAAGGCCCTATTGTGGAAATGTGGACCAAACATGCATCACCTCATAGTAAAACCAATGAAACAAACACCACAAGATCCTCAGACAAAGAATGGTTCATAGGCTCCATTTTAATACTCATTGCCGCACTTGCCTGGGCATCACTATTTGTTTTACAAGCTAAAGCCTTAGAAACATACAAGAATCATCAGCTAAGCCTCACATCACTTATGTGCTTCATTGGCACTCTTCAAGCTATTGCTGTTACTTTTGTTATGGAGCACAAGGCTTCTGTGTGGACAATTGGTTGGGATATGAATTTACTTGCTGCTGCCTATGCTGGAATTGTTACATCAAGTATAACATACTACGTCCAAGGATTGGTAATTATGAAGAAAGGGCCTGTTTTTGCAACTGCATTTAGCCCTCTGATGATGATCATTGTAGGCATCATGGGTTCCTTTATCCTTGCAGAACAGATTTTTCTTGGAGGGGTGATTGGTTCTATCTTGATTGTCATAGGCTTATACTCTGTTCTGTGGGGAAAGCACAAAGAACAAATGGAAAACAAAGTGGAAGAGGATATACCCTTGCCTGTAAAGGGTACTCAGGTTGATGGAAATCAAGGGACACTTGTTGATTCCACTGAGCAATTTGCTGAAGCAAATCAGATCAAAAAGTAG 1143 0.4103 MATQKLRFGAKFLENSKHYFAMIAIQFGFAGMNIITKVSLSRGMSHYVLVVYRHAIATAAIAPFAFIFERKAQPKITFPIFIQIFILALLGPVIDQNFYYAGLKFTSPTFSCALSNVLPAMTFVMAVLCRMEKINMKKVRCQAKVVGTIVTVAGAMLMTIYKGPIVEMWTKHASPHSKTNETNTTRSSDKEWFIGSILILIAALAWASLFVLQAKALETYKNHQLSLTSLMCFIGTLQAIAVTFVMEHKASVWTIGWDMNLLAAAYAGIVTSSITYYVQGLVIMKKGPVFATAFSPLMMIIVGIMGSFILAEQIFLGGVIGSILIVIGLYSVLWGKHKEQMENKVEEDIPLPVKGTQVDGNQGTLVDSTEQFAEANQIKK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02220 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Rops7g02220 380 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020
Rops7g02220 380 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020
Rops7g02220 380 PANTHER WAT1-RELATED PROTEIN 19 342 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02220 Rops-Chr7 38168294 38171813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02220 1 363 Nodulin-like Gene Family AT5G07050 67.196 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02220 - - gmx:100799947 606.29