Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02202 ATGTCAATGGCTCACTCATGGGCAGGTTTCTGCTCGTGGGATTTTTACACCAAGGAAGTGAGAGCATTCCAAGTTGAGGTTGGAACAACATCCTCAAGAACAGCACTCCCAACACCTACTTCTGTTTTGGGTCTTCCAATCGGTCAACACATAAGTCGTAGGGGTAAGGATGCCCAGGGTGAAGATGTTATCAAACCATATACCCCTACAACTTTGGATTCTGATGTTGGACATTTTGAACTGGTTATTAAGATGTACCCACAAGGGAGGATGTCACACCATTTCCGTGAGATGCGTGATGGTGACTATCGTGCTGTAAAAGGACCCAAGGGACGTTTCAAGTACCAACCAGGTGAGGTTAGAGCATTTGGGATGCTTGCTGGAGGGTCTGGAATCACTCCAATGTTCCAAGTTGCTAGAGCTATATTGGAAAACCCAAAGGTGTGTTTCCAGCAGTTGTCCTCTTCTTAA 471 0.4586 MSMAHSWAGFCSWDFYTKEVRAFQVEVGTTSSRTALPTPTSVLGLPIGQHISRRGKDAQGEDVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRDGDYRAVKGPKGRFKYQPGEVRAFGMLAGGSGITPMFQVARAILENPKVCFQQLSSS* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02202 156 Pfam Oxidoreductase FAD-binding domain 30 115 IPR008333 -
Rops7g02202 156 SUPERFAMILY Riboflavin synthase domain-like 33 117 IPR017938 -
Rops7g02202 156 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 106 147 IPR039261 -
Rops7g02202 156 CDD cyt_b5_reduct_like 33 147 - -
Rops7g02202 156 Gene3D Translation factors 17 107 - -
Rops7g02202 156 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 13 116 IPR017927 GO:0016491
Rops7g02202 156 Pfam Oxidoreductase NAD-binding domain 125 147 IPR001433 GO:0016491
Rops7g02202 156 FunFam NADH-cytochrome b5 reductase 14 106 - -
Rops7g02202 156 Gene3D - 108 153 IPR039261 -
Rops7g02202 156 PANTHER NADH-CYTOCHROME B5 REDUCTASE 30 147 IPR001834 GO:0016491
Rops7g02202 156 PRINTS Cytochrome B5 reductase signature 124 143 - -
Rops7g02202 156 PRINTS Cytochrome B5 reductase signature 65 72 - -
Rops7g02202 156 PRINTS Cytochrome B5 reductase signature 43 54 - -
Rops7g02202 156 PRINTS Cytochrome B5 reductase signature 101 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02202 Rops-Chr7 37704129 37705399 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02202 18 146 NADPH P450 reductases AT5G17770 81.395 1.50e-70 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02202 K00326 - sspl:121797372 224.557