Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02197 ATGAGGCAGGCAGGTATTGTGAACATGGCAGAGTTCCTTGAGAAGCAGTTGGCTTCAGAGTTATCAAAGATGACACTAGAAGAAGCTTTCACTCTGGCTTGTGCCTTCTGTCATTATCTTACTTTGATGGTATTGCTGAAACCCATCATAGAAGACTTCGTTCTGAGATCTCCATTCATCAAGACTGGTTGCAGGGCTAGAGTCCAGAGATCTAAAGACACATTGTTGCTATCCAATGGCATCTCAAATCAAATACGATGTCTTCTTGATGCCTTCGTGGATGATGACAGACTTGAAGTAGGAGATGAAATATCACCTGCTCTTCTCAAAGCCATTGAAGAATCACATATTTCTTTGGTCATATTCTCCAAAGACTATGCTTCCTCAAGATGGTGCTTGGCAGAGCTTGTGAAAATAATTGAATGCATGGACAGGAATAAACAAATTGTGATTCCTGTTTTCAACAACATAGATCCATCTGATGTACGGCACCAAAAGGGGACTTACGGGGATGCATTAGCTAAACATGAAAAAGATAAAAGAAACCTAGACAAGGTGCCAAATTGGAGATCTGCTTTGGAAAAAGCTGCTAATCGTTCTGGAATTTGTTCATCAAACTTTCGGGATGAAGCTGAGCTTATAGAAGAAATTGTCAAATGTTTGTTGTACAAATTGAATCCTATGTACCAAAGTGGGTTAACAGACCTTGTTGGAATTGAAGAACGGATTGCAGATGTGAAGTCAATATTGCGCCTAGGGTCAACAACAGATGTTCGTGTCATTGGGATTTGGGGCATGGGAGGTATTGGCAAAACAACTATTGCCGAAGAAGTATATAACCGTCTTTGTTCTAAATTTGATGGGTGTTGCTTTATGGCAAACATAACGGAAGAATTAGAGAAACATGGAATGATTGGTTTGAAGAATAAAATTTTCTCTAAATTACTAAAGGAAGATGTACAGATTGACACACCTAATGGAGTTCCCCCTTATGTTAAGAGAAGGCTGGTTCGTAAGAAGGTTCTTCTTGTTCTTGATGATATCAATGATTCAGAGCACCTAGAAAATTTAGTTGGAGCCCTTGATTTGTTTGGATATGGTAGCAGAATCATTGTAACAACTAGAGATAAGCAAGTGCTTGGTAACAAAGTTGACAATGACAGTATATATGCGGCTAAGGCATTAAGCTCCGATGAAGCTAATAAACTTTTCATTTCAAATGCCTTCAAAGAAAATTGTCTTGACATGGAGTGGATTGAGCTATCAGGATGGGTGATGCAGTATGCTGATGGAAACCCATTAGCTTTAAAAGTACTGGGTTCTTTTCTTTATGGTAAAAGCAAAATAGAATGGGAAAGCCAATTGCAGAAACTTAAAAAAGCGCCTCACCAAAAAATTCAAAATGTATTGAGGTTGACTTATGATGGACTTGATCAACCAGAGAAGGAAATATTTCTATATGTTGCATGTTTTTTGAAAGGATTTGAATTTAAACGAATAATAGATCTACTTGATGCTTGTGGTTTCTCAACAATTATTGGGTTGAAAGTCCTTCAAGACAAAGCCCTTATAATTGAAGCCAAGGACTTTGGAAGGAGATCAATTGTATGGATGCATGACTTGATACAAGAAATGGGTTGGCAGATTGTTCGAGAAGAATGTGTTGATGACCCTGGGCAACACAGTAGGTTATGGGATCCTAATGATATTTGTCAAGTATTGAAAAATAACACGGGAACTGAGACCATTAAAAGCATAACTCTAAACGTCTCAAAATTGGATGAGCTGTCCTTAGGTCCTCAGGTCTTTGCAAGGATGCAACAGTTAAAGTTTTTTGAAGTTACCCGAAGTCATGGCCATGAGCCAATCTTGTATTTTCCTCAGGGCCTTGAATATTTGCCAAATGACCTACGATTTTTTCGTTGGGATAATTATCCTTTGAAATCCTTGCCTCAGTCTTTTTGTGCAGAAAATCTTGTTGAGCTCAATATGATTGAGAGCCGAGTGGAAAAACTCTGGGATGGGATCCAGAATCTTGAAAATTTAAAGAAAATTGACCTCAGTGATTCCGAATATCTGCTAGAGCTCCCAGATTTTTCAAAGGCCTCAAATCTTGAAGAAGTGGAACTCTGTGGTTGCAGAAATTTGCGTAATGTTCATCCGTCTATTTTATCTCTCAACAAGCTTGTGCTATTAAACCTAACTTTATGCAAAGCGCTTACCAGTCTTCGAGTTGCATGCTCTGATAAGAAAGAAACACTCGCTCCAAAACAGCAATACGAGAAACCCTTTCCACACCCTCAAACTGAAACTTGGAAGAGTGAAACACAGGGCTTGAAAGATATATTGCCTCAGCCCTCTCGAATTGCAACTGGGAAGCGTGAAACACAGGGCTTGAAAGATATATTGCCTCAGTCCTCTCGAATTGCAACTGGGAAGCGTGCAACACAGCTTAAAAGATATATTGCTCCTGAGTTTCTGAAAGATGAAACAGCAGCCTGTGACCATGATGATGGCTTAATTCCCCCATTCAGTAGGCTAGATGCTTTGTTTGCTGAAATTTTTATTCTTTTAGACTCTAGCTCCAGCCTTCCCTTATCAGACATGGAAGAGACAGACAATGGGAAGATGGAAGTAACATTGATTTGTTCGCGAAAACAGGCTGCATTGAATGAATAG 2679 0.3923 MRQAGIVNMAEFLEKQLASELSKMTLEEAFTLACAFCHYLTLMVLLKPIIEDFVLRSPFIKTGCRARVQRSKDTLLLSNGISNQIRCLLDAFVDDDRLEVGDEISPALLKAIEESHISLVIFSKDYASSRWCLAELVKIIECMDRNKQIVIPVFNNIDPSDVRHQKGTYGDALAKHEKDKRNLDKVPNWRSALEKAANRSGICSSNFRDEAELIEEIVKCLLYKLNPMYQSGLTDLVGIEERIADVKSILRLGSTTDVRVIGIWGMGGIGKTTIAEEVYNRLCSKFDGCCFMANITEELEKHGMIGLKNKIFSKLLKEDVQIDTPNGVPPYVKRRLVRKKVLLVLDDINDSEHLENLVGALDLFGYGSRIIVTTRDKQVLGNKVDNDSIYAAKALSSDEANKLFISNAFKENCLDMEWIELSGWVMQYADGNPLALKVLGSFLYGKSKIEWESQLQKLKKAPHQKIQNVLRLTYDGLDQPEKEIFLYVACFLKGFEFKRIIDLLDACGFSTIIGLKVLQDKALIIEAKDFGRRSIVWMHDLIQEMGWQIVREECVDDPGQHSRLWDPNDICQVLKNNTGTETIKSITLNVSKLDELSLGPQVFARMQQLKFFEVTRSHGHEPILYFPQGLEYLPNDLRFFRWDNYPLKSLPQSFCAENLVELNMIESRVEKLWDGIQNLENLKKIDLSDSEYLLELPDFSKASNLEEVELCGCRNLRNVHPSILSLNKLVLLNLTLCKALTSLRVACSDKKETLAPKQQYEKPFPHPQTETWKSETQGLKDILPQPSRIATGKRETQGLKDILPQSSRIATGKRATQLKRYIAPEFLKDETAACDHDDGLIPPFSRLDALFAEIFILLDSSSSLPLSDMEETDNGKMEVTLICSRKQAALNE* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02197 892 SUPERFAMILY L domain-like 537 743 - -
Rops7g02197 892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 487 IPR027417 -
Rops7g02197 892 Pfam TIR domain 86 237 IPR000157 GO:0007165
Rops7g02197 892 PRINTS Disease resistance protein signature 335 349 - -
Rops7g02197 892 PRINTS Disease resistance protein signature 429 443 - -
Rops7g02197 892 PRINTS Disease resistance protein signature 260 275 - -
Rops7g02197 892 PRINTS Disease resistance protein signature 677 693 - -
Rops7g02197 892 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 89 748 IPR044974 GO:0006952
Rops7g02197 892 Pfam Leucine Rich Repeat 658 677 IPR011713 -
Rops7g02197 892 SUPERFAMILY Toll/Interleukin receptor TIR domain 89 201 IPR035897 -
Rops7g02197 892 ProSiteProfiles TIR domain profile. 54 225 IPR000157 GO:0007165
Rops7g02197 892 Gene3D - 230 386 IPR027417 -
Rops7g02197 892 Pfam NB-ARC domain 247 467 IPR002182 GO:0043531
Rops7g02197 892 Gene3D - 394 478 IPR042197 -
Rops7g02197 892 Gene3D - 76 229 IPR035897 -
Rops7g02197 892 SMART till_3 49 199 IPR000157 GO:0007165
Rops7g02197 892 Gene3D Ribonuclease Inhibitor 564 755 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02197 Rops-Chr7 37554012 37563168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02197 109 743 WRKY Transcription Factor Family AT4G12020 33.076 1.84e-91 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02197 - - ccaj:109805840 935.25