Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02185 ATGATGGCAACAAAACTCACTTTGAGAACAACAATACTCATTGCTATCCTTAGATTTCTTGGCTTCATGACCCTTTTCACCAAAGCAAGTGCACAATCCCCAAACTATGTGGGTGATGATTGCAAAAACTCAACAGAACAAGCCCTCACCACTACATACCAAACCAACCTTAACAAGGTCCTCTCATGGATTTCCTCTGATGCTACCACAAGCCAGGGATATAACCACACCATCATAGGAACTAACACAGTTGATGCTGTCTATGGTCTCTATGATTGCAGGGGTGATGTCAAAGGATCTTTCTGCCAATTTTGTGTCTCAACTGCAGCCTCAGAAATTCTTCAAATTTGTCCCAACAGATCCTCTGCTGTTATATGGTACAACTTTTGCATTCTCAGGTACTCAAACCATAATTTCTTTGGAAACCTTACCACAAGCCCATCATGGCAAATTTTGGGGTCCAAGAACATCACTAATCCAGAAGAACCTCAGAAAGCAGAGAATTATATGCAAAGTTTGATAAGAGAAGCTACTGTGGAGACCAACAAGTTGTATGCAATGGGTGAGTTCAATTTGAGCCATTCTGAGGAAAGATATGGGTTGGTTCAGTGCAGTAGGGACATCACTAATAAAGAGTGTAGCCAGTGTGTGGAGGATATGTTAGACAAAGTTCCTCAATGTTGTGGGACAAAGGTGGGATGGCAGGTTTTAGCTCCCAGCTGTTTGATAAAGTATGATGATTTTATGTTCTACCAGATTACTGATCAAGCAGCTTCTCCTTTGCCTAATCCAGCCAAGCAGGGAGGTACAAGTAAGTCAAAAACCTTGATCATCATCATAGTAAGTGTGTTGGTGGCACTAGCTCTACTAGGTTGCTGTATCTACTACTTAAGGAGACGGTATCTGTCAAATAAAGTAGGTGGACTGCTGTTGGAGACCATTCCTGTATCATGTGATGACCATGTTCAAAGAGAGGATTCACTGAATTCAGACCTTCCTACAATCCCTTTAATTTGGATTCAACAAAGCACTAATAACTTTTCAGAGTCCTGTAAATTAGGAGAAGGTGGATTTGGCCCTGTCTACAAGGGTAATTTAGTAGATGGAACTGAAATTGCTGTCAAAAGACTCTCTATAACATCTGGTCAAGGTGTAGAGGAATTCAAGAATGAAGTAATCGTTATAGCCAAACTGCAACATAATAACCTTGTGAGGCTCTTGGGTTGCTGCATTGAGGAAAATGAAAAGCTGCTTGTATATGAGTACATGCCTAATTCTAGCCTTGACTCTCATCTGATCAATGAGGAAAAACGGAAGCAACTAGATTGGAAGTTACGATTGAGTATCATTAATGGAATTGCAAAAGGACTTTTGTACCTTCATGAAGATTCTAGACTTAAAGTAATCCATAGAGATTTGAAAGCAAGCAATGTTCTTCTTGATCAAGAGATGAATCCAAAAATATCAGATTTTGGATTAGCAAGGGCATTTGAAAAAGGCCAGAGTCAGCAAAATACAAAAAGAGTTGTGGGCACCTATGGATACATGGCTCCAGAATATGCTATGGAAGGGTTATATTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAAATAATTTGTGGGCAAAGGAATAGTGGATTCTATAATTCAGAACATGGTCAAAGTCTTCTTATATATAGTTGGAGACTTTGGTGTGAAGGAAAAAGTTTGGAACTATTAGATCCGATACTACAAGAGACATACATAGCCAATGAAGTAATGAAGTGCATACATATTGGTTTATTATGTGCGCAGGAAGATGCAGTAGATAGACCAACCATGTCCACAGTTGTTGTCATGCTTGCAAGTAATACAATGGCACTTCCTAAACCTAATCATCCAGCATTTTCAGTTGGAAGAAGGATCAAGGAGGAAGAATCAACATCAAGAGCTTCCAAGGACGCTTCTGTTAATGAAGTAACAGTATCAAATATTTTACCTAGATAG 1998 0.3929 MMATKLTLRTTILIAILRFLGFMTLFTKASAQSPNYVGDDCKNSTEQALTTTYQTNLNKVLSWISSDATTSQGYNHTIIGTNTVDAVYGLYDCRGDVKGSFCQFCVSTAASEILQICPNRSSAVIWYNFCILRYSNHNFFGNLTTSPSWQILGSKNITNPEEPQKAENYMQSLIREATVETNKLYAMGEFNLSHSEERYGLVQCSRDITNKECSQCVEDMLDKVPQCCGTKVGWQVLAPSCLIKYDDFMFYQITDQAASPLPNPAKQGGTSKSKTLIIIIVSVLVALALLGCCIYYLRRRYLSNKVGGLLLETIPVSCDDHVQREDSLNSDLPTIPLIWIQQSTNNFSESCKLGEGGFGPVYKGNLVDGTEIAVKRLSITSGQGVEEFKNEVIVIAKLQHNNLVRLLGCCIEENEKLLVYEYMPNSSLDSHLINEEKRKQLDWKLRLSIINGIAKGLLYLHEDSRLKVIHRDLKASNVLLDQEMNPKISDFGLARAFEKGQSQQNTKRVVGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGQRNSGFYNSEHGQSLLIYSWRLWCEGKSLELLDPILQETYIANEVMKCIHIGLLCAQEDAVDRPTMSTVVVMLASNTMALPKPNHPAFSVGRRIKEEESTSRASKDASVNEVTVSNILPR* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02185 665 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 314 422 - -
Rops7g02185 665 ProSiteProfiles Gnk2-homologous domain profile. 35 139 IPR002902 -
Rops7g02185 665 FunFam Cysteine-rich receptor-like protein kinase 10 148 250 - -
Rops7g02185 665 Pfam Protein tyrosine and serine/threonine kinase 351 616 IPR001245 GO:0004672|GO:0006468
Rops7g02185 665 SMART serkin_6 347 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02185 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Rops7g02185 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 660 - -
Rops7g02185 665 FunFam Liguleless narrow1 423 626 - -
Rops7g02185 665 Gene3D Phosphorylase Kinase; domain 1 316 422 - -
Rops7g02185 665 Gene3D Transferase(Phosphotransferase) domain 1 423 628 - -
Rops7g02185 665 ProSiteProfiles Gnk2-homologous domain profile. 145 250 IPR002902 -
Rops7g02185 665 Pfam Salt stress response/antifungal 166 246 IPR002902 -
Rops7g02185 665 Pfam Salt stress response/antifungal 41 136 IPR002902 -
Rops7g02185 665 ProSiteProfiles Protein kinase domain profile. 347 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02185 665 Gene3D - 35 139 IPR038408 -
Rops7g02185 665 Gene3D - 148 250 IPR038408 -
Rops7g02185 665 FunFam Cysteine-rich receptor-like protein kinase 28 37 138 - -
Rops7g02185 665 CDD STKc_IRAK 353 618 - -
Rops7g02185 665 SUPERFAMILY Protein kinase-like (PK-like) 330 618 IPR011009 -
Rops7g02185 665 Pfam Domain of unknown function (DUF3403) 620 665 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02185 Rops-Chr7 37378180 37383990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02185 19 665 Receptor kinase-like Gene Family AT4G05200 42.268 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02185 PK_Tyr_Ser-Thr 7.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02185 - - mtr:25490357 952.584