Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02184 ATGATGGCAACAAAACTCACTATGAGAACAACAATACTCATTGCCATCCTTAGATTTCTTGGCTTCATGACCCTTTTCACCAAAGCAAGTGCACAATCCCCAAACTATGTGGGTGATGATTGCAAAAACTCAACAGAGCAAGCCCTCACCACTACATACCAAACCAACCTTAACAAGGTCCTCTCATGGATTTCCTCTGATGCTACCACAAGCCAGGGATATAATCACACCAGCATAGGAACCAACACAGTTGATGCTGTCTATGGTCTCTATGATTGCAGGGGTGATGTCAAGGGATCTTTCTGCCAATTCTGTGTCTCAACTGCAGCCTCAGAAATTCTTCAACGTTGTCCAAACAGATCCTCTGCTATTATGTGGTACAACTTCTGCAGTTTAAGATACTCCAACCATGATTTCATTGGGAACCTTACCACAAGCCCATCATGGCAAATTTTGGGGTCCAAGAACGTCACTAATCCAGAAGAACCTCAGAAAGCAGAGAATTATATGCAGAGTTTGATAAGAGAAGCTACTGTGGAGACCAACAAGTTGTATGCAATGGGTGAGTTCAATTTGAGACACTCTGAAGAAAGATATGGGTTGGTGCAGTGCGGTAGGGACCTTACTAATAAAGAGTGTAGCGAGTGTTTGGAGGATATGTTAGACAAAGTTCCTCAATGTTGTGGGACAAAGGTGGGATGGCAGGTTTTGGCTCCCAGCTGTTTGATAAAGTATGATGATTTTATGTTCTACCAGATTACTGATCAAGCAGCTTCTCCTTTGCCTAATCCAGCCAAGCAGGGAGGTACAAGTAAGTCAAAAACCTTGATCATCATCATAGTAAGTGTGTTGGTGGCACTAGCTTTACTAGGTTGCTGTATCTACTACTTAAGGAGACGGTATCTGTCAAATGAAGGTGGACTACTGTCAGAGACCATTCCTATATCCTTTCATGACCATGTTCAAAGAGAGGATTTACTGAACGCAGACCTTCCTACCATCCCTTTAATTTGGATTCGACAGAGCACTAATAACTTTTCAGAGTCCTGTAAATTAGGAGAAGGTGGATTTGGCCCAGTCTACAAGGGTAATTTAGTAGATGGAACTGAAATTGCTGTCAAAAGACTCTCTATAACATCTCGTCAAGGTGTAGAGGAATTCAAGAATGAAGTAATCTTTATTGCCAAACTACAACATAATAACCTTGTGAGGCTCTTGGGTTGCTGCATTGAGGAAAATGAAAAGCTGCTTGTATATGAGTACATGCCTAATTCTAGCCTTGACTCTCATCTGTTCAATGAGGAAAAACGGAAGCAACTAGATTGGAAGTTACGATTGAGTATCCTTAATGGAATTGCAAAAGGACTTTTGTACCTTCATGAAGATTCTAGACTTAAAGTAATCCATAGAGATTTGAAAGCAAGCAATGTTCTTCTGGATCAAGATATGAATCCAAAAATATCAGATTTTGGATTAGCAAGGGAATTTAAAAAAGGCCAGAGTCAGGAAAATACAAAAAGAGTTGTGGGCACCTATGGATACATGGCTCCAGAATATGCTATGGCAGGGCGATATTCAGTAAAATCTGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAATTAATTTGTGGGCAAAGGAATAGTGGATTCTATAATTTAGAGCATGGTGAAACTCTTCTTATATATAGTTGGAGACTTTGGTGTGAGGGAAAAAGTTTGGAACTGTTAGATCCAATATTGAAAGAGACATACATAGCCAATGAAGTTATGAAGTGCATACATATTGGTCTGTTATGTGTACAGGAAGATGCAGTAGATAGACCAACCATGTCCACAATTGTTGTCATGCTTGCAAGTAATACAATGGCATTTCCTAAACCTAATCATCCAGCATTTTCAGTTGGAAGAAAGATCAAGGAAGAAGAATCCACATCAAGAGCTTCCAAGGATGCTTCTGTTAATGAAGTAACAATATCAAATATTTTACCAAGGTAG 1995 0.397 MMATKLTMRTTILIAILRFLGFMTLFTKASAQSPNYVGDDCKNSTEQALTTTYQTNLNKVLSWISSDATTSQGYNHTSIGTNTVDAVYGLYDCRGDVKGSFCQFCVSTAASEILQRCPNRSSAIMWYNFCSLRYSNHDFIGNLTTSPSWQILGSKNVTNPEEPQKAENYMQSLIREATVETNKLYAMGEFNLRHSEERYGLVQCGRDLTNKECSECLEDMLDKVPQCCGTKVGWQVLAPSCLIKYDDFMFYQITDQAASPLPNPAKQGGTSKSKTLIIIIVSVLVALALLGCCIYYLRRRYLSNEGGLLSETIPISFHDHVQREDLLNADLPTIPLIWIRQSTNNFSESCKLGEGGFGPVYKGNLVDGTEIAVKRLSITSRQGVEEFKNEVIFIAKLQHNNLVRLLGCCIEENEKLLVYEYMPNSSLDSHLFNEEKRKQLDWKLRLSILNGIAKGLLYLHEDSRLKVIHRDLKASNVLLDQDMNPKISDFGLAREFKKGQSQENTKRVVGTYGYMAPEYAMAGRYSVKSDVFSFGVLLLELICGQRNSGFYNLEHGETLLIYSWRLWCEGKSLELLDPILKETYIANEVMKCIHIGLLCVQEDAVDRPTMSTIVVMLASNTMAFPKPNHPAFSVGRKIKEEESTSRASKDASVNEVTISNILPR* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02184 664 Gene3D Phosphorylase Kinase; domain 1 313 421 - -
Rops7g02184 664 CDD STKc_IRAK 352 617 - -
Rops7g02184 664 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 314 421 - -
Rops7g02184 664 FunFam cysteine-rich receptor-like protein kinase 10 422 624 - -
Rops7g02184 664 Pfam Salt stress response/antifungal 166 246 IPR002902 -
Rops7g02184 664 Pfam Salt stress response/antifungal 41 136 IPR002902 -
Rops7g02184 664 ProSiteProfiles Protein kinase domain profile. 346 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02184 664 Pfam Domain of unknown function (DUF3403) 619 664 IPR021820 GO:0004674
Rops7g02184 664 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 41 660 - -
Rops7g02184 664 SUPERFAMILY Protein kinase-like (PK-like) 330 617 IPR011009 -
Rops7g02184 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Rops7g02184 664 FunFam Cysteine-rich receptor-like protein kinase 28 37 138 - -
Rops7g02184 664 SMART serkin_6 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02184 664 Pfam Protein tyrosine and serine/threonine kinase 350 616 IPR001245 GO:0004672|GO:0006468
Rops7g02184 664 Gene3D Transferase(Phosphotransferase) domain 1 422 627 - -
Rops7g02184 664 Gene3D - 148 250 IPR038408 -
Rops7g02184 664 Gene3D - 35 139 IPR038408 -
Rops7g02184 664 ProSiteProfiles Gnk2-homologous domain profile. 145 250 IPR002902 -
Rops7g02184 664 ProSiteProfiles Gnk2-homologous domain profile. 35 139 IPR002902 -
Rops7g02184 664 FunFam Cysteine-rich receptor-like protein kinase 10 148 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02184 Rops-Chr7 37348947 37354276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02184 19 664 Receptor kinase-like Gene Family AT4G05200 42.541 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02184 PK_Tyr_Ser-Thr 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02184 - - mtr:25490357 945.266