Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02183 ATGACCCTTTTTTTTACCAAATCAAGTGCACAATCCCCAAACTATGTGGGTGATAACTGCCACAACTTAACAGAACAAGTCCTCACCACTACATATCAAACCAACCTTAACAAGGTCATCTCATGGATGTCCTCTGATGCTTCCACAAGCAAGGGATATAACCACACCAGAATAGGATCCAACACAGTTGATGCTGTTTATGGCCTCTATGATTGCAGGGGTGATGTCAAAGGATCTTTCTGCCAGTTTTGTGTCAATACTGCAGCCTCAGAAATTCTTCAACGTTGTCCTAACAGACCCTCTGCTGCAATATGGTACAACTTTTGCATTCTCAGGTACTCCAACCATGATTTCTATGGGAACCTTACAGCTAGCCCATCAATGCCAGTTTTGGGGTCCAAGAACATCACTAGTTCAGATGAACTTCAGAAAGCTGAGAATTATATGCAAAGTTTGATAAGAGAAGCTACTGTGGAAACAAAGTTGTATGCAATGGGTGAGTTCAATTTGAGCTCTTCAGAGAAAAGATATGGGTTGGTGCAGTGTACTAGGGACCTTACTAATAAGGAGTGTAGCCAGTGTTTAGAGGCTTTGTTAGATGAAGTTCCTCATTGCTGTGGGACAAAGGTGGGATGGCAGGTTTTTGCTCCTAGCTGTTTGATAATGTATGATGATTATATGTTCTTCCAGATTACTGATCAAGCACCTTCTCCTTTGACTAATCCAGGTGGACCACCATCAGAGACCATTCCTCTATCCATTCAAGACAATGCTCAGCAAGAGGATTCATTGAATGCAGACCTTCCTACAATCCCTTTAATTTGGATTCGACAAAGCACTAATAACTTTTCAGAGTCTTGTAAATTAGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGTAATTTAGTAGATGGAACAGAAATTGCTGCCAAAAGACTCTCTAAAACATCTGGTCAAGGTTTAGAGGAATTCAAGAATGAAGTAATCTTTATAGCTAAACTGCAACATAGGAACCTCGTGAGACTCTTGTGTTGCTGCATTGAGGAAAATGAAAAGTTGCTTGTATACGAGTTCATGCCAAATTCTAGCCTTGACTTTCATTTGTTTAATGAGGAAAAACGAAAGCAACTAGATTGGAAGTTAAGATTAGGTATTATTAATGGAATTGCAAAAGGACTTACGTATCTTCATGAAGACTCTAGACTTAGAGTAATCCATAGAGATATGAAAGCAAGCAATGTTCTTCTAGATCAAGAGATGAATCCAAAAATTTCACATTTTGGCATGGCAAGAGCATTTGTAAAAGGCCAAAGTCAAGAAAATACAAGAAGAGTTATGGGCACCTATGGATACATGGCTCCAGAATATGCTATGGAAGGGTTATATTCAGTGAAATCTGACGTGTTCAGCTTTGGAGTTCTTTTATTAGAAATAATTTGTGGGCAAAGAAATAGTGGATTTTATAATTTAGAACATGGTCAAAGTCTTCTTGTATATAGTTGGAGACTTTGGTGTGAAGGAAAAAGTTTGGAACTGTTAGATCCAACATTACAAAAAACATATACTACCAATGAAGTTATGAGGTGCATACACATTGGTTTGCTGTGTGTACAAGAAGATGCACTAGATAGACCAACCATGTCCACAGTTGTTGTCATGCTTGCAAGTAACACAATGGCACTTCCTGATCCAAAACATCCGGCATTTTCAGTTGGAAGAAAGATTAAGGAAGAAGAATCAACATCAAAAACTTCCAAAGAAGCTTCAATTAATGATGTAACAATATCAAATATTTTACCTAGGTAG 1806 0.3848 MTLFFTKSSAQSPNYVGDNCHNLTEQVLTTTYQTNLNKVISWMSSDASTSKGYNHTRIGSNTVDAVYGLYDCRGDVKGSFCQFCVNTAASEILQRCPNRPSAAIWYNFCILRYSNHDFYGNLTASPSMPVLGSKNITSSDELQKAENYMQSLIREATVETKLYAMGEFNLSSSEKRYGLVQCTRDLTNKECSQCLEALLDEVPHCCGTKVGWQVFAPSCLIMYDDYMFFQITDQAPSPLTNPGGPPSETIPLSIQDNAQQEDSLNADLPTIPLIWIRQSTNNFSESCKLGEGGFGPVYKGNLVDGTEIAAKRLSKTSGQGLEEFKNEVIFIAKLQHRNLVRLLCCCIEENEKLLVYEFMPNSSLDFHLFNEEKRKQLDWKLRLGIINGIAKGLTYLHEDSRLRVIHRDMKASNVLLDQEMNPKISHFGMARAFVKGQSQENTRRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGQRNSGFYNLEHGQSLLVYSWRLWCEGKSLELLDPTLQKTYTTNEVMRCIHIGLLCVQEDALDRPTMSTVVVMLASNTMALPDPKHPAFSVGRKIKEEESTSKTSKEASINDVTISNILPR* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02183 601 FunFam Cysteine-rich receptor-like protein kinase 28 16 117 - -
Rops7g02183 601 ProSiteProfiles Gnk2-homologous domain profile. 14 118 IPR002902 -
Rops7g02183 601 Gene3D Transferase(Phosphotransferase) domain 1 359 563 - -
Rops7g02183 601 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 248 358 - -
Rops7g02183 601 FunFam cysteine-rich receptor-like protein kinase 10 359 561 - -
Rops7g02183 601 Gene3D Phosphorylase Kinase; domain 1 249 358 - -
Rops7g02183 601 FunFam Cysteine-rich receptor-like protein kinase 10 127 228 - -
Rops7g02183 601 Pfam Protein tyrosine and serine/threonine kinase 287 553 IPR001245 GO:0004672|GO:0006468
Rops7g02183 601 ProSiteProfiles Protein kinase domain profile. 283 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02183 601 ProSiteProfiles Gnk2-homologous domain profile. 123 228 IPR002902 -
Rops7g02183 601 SUPERFAMILY Protein kinase-like (PK-like) 268 569 IPR011009 -
Rops7g02183 601 Gene3D - 128 228 IPR038408 -
Rops7g02183 601 Gene3D - 14 118 IPR038408 -
Rops7g02183 601 SMART serkin_6 283 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02183 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Rops7g02183 601 Pfam Salt stress response/antifungal 28 115 IPR002902 -
Rops7g02183 601 Pfam Salt stress response/antifungal 145 226 IPR002902 -
Rops7g02183 601 Pfam Domain of unknown function (DUF3403) 556 601 IPR021820 GO:0004674
Rops7g02183 601 CDD STKc_IRAK 289 554 - -
Rops7g02183 601 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02183 Rops-Chr7 37329466 37338529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02183 7 601 Receptor kinase-like Gene Family AT4G05200 42.705 8.85e-176 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02183 PK_Tyr_Ser-Thr 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02183 - - mtr:25490357 880.552