Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02179 ATGATGGAACCAAAACTAACTTTGATCCTTAGATTTCTTGGCTTCTTAATCCTTTTCACCATAGCAAGTGGACAATCCCCAAACTATGTAGGTGATGACTGCCAGCATTCAACAGAAAGAAACCTCACCACTACATACCAAACCAACCTTAAGCAGGTCCTCTTATGGATGTCCTCTGATTCTACCACAAGTCAGGGATATAACCAGACCAGCATAGGAACCAACACAACTGATGCAATCTATGGCCTCTATGATTGCAGAGGTGATGTCAAAGGATCTTTCTGCCAATTCTGTATCTCAACTGCAGCCTCAGAAATTCTTCAACGTTGTCCTAACAGATCCTCTGCTATTATATGGTACAACTTCTGCACTGTTAGGTACTCCAACCATGATTACTCTGGGGACCTTATCACCACCCCATCATGGGAAATTTTGGGGTCCAAGAACATCACTAGTTCAGATGAACTTCAGAAAGCTGAGAATTATATGCAAAGTTTGATAAAAGAAGCTACTGTGGAGACCAACAAGTTGTATGCAATGGGGGAGTTCAATTTGAGCAATTCTGAACAAAGATATGGGTTGGTGCAGTGCAATAGGGACATTAGTAATGAAGAGTGTAGCCAGTGTTTGGAGGATGTGTTAGACAAAGTTTCTCAATGCTGTGGGACAAAGGTGGGATGGCAGGTTTTGGTTCCCAGTTGTCTAATGAAGTATGATGATTTTATGTTCTACCTCACTACTGATCAATCACCTTCTCCTTTGCCTAATCCAGCCAATCAGGGAGGTACAAGTAAGTCAAAAACCGTGATCATCATCATTGTGTGTGTGTTAGTGGCACTAGCTCTACTAAGTTGCTGTATCTACTACTTGTGGTGGCAGTATAAGTCAAATAAAGGTGGACTTATATCAGAGACCACTCCTCTATCCTTTCATGACCATGTTCAAAGAGAGGATTCACTGAATGCAGACCTTCCTACAATCCCTTTAATTTGGATTCGACAGAGTACTGATAACTTTTCAGAGTCCTGTAAATTAGGAGAAGGTGGATTTGGCCTTGTTTACAAGGGTAACTTAGAAGATGGAACAGAAATTGCTGTTAAAAGACTCTCTAAAACATTTGGAACTGGTCAAGGTTTGGAAGAGTTCAAGAATGAAGTCATCTTTATAGCCAAACTACAACATAGGAACCTTGTGAGACTCTTGGGTTGCTGCATTGAGGAAAATGAAAAGATGCTTGTATATGAGTACATGCCAAATTCTAGCCTTGACTATCATCTGTTCAATGAGGAAAAACGAAAGCAACTGGATTGGAAGTTAAGATCGAGTATTATTAATGGAATTGCAAAAGGACTATTGTACCTTCATGAAGACTCTAGACTTAGAGTAATCCACAGAGATTTGAAAGCAAGCAATGTTCTTTTGGATCAAGAGATGAATCCAAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAGAAAGGCCAGAGTCAGGAAAATACAAAAAGAGTTATGGGCACCTATGGATACATGGCTCCAGAATATGCTATGGAAGGGTTATATTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAAATAATTTGTGGGCAAAGGAATAGTGGATTCTATAATTCAGAACATGGTCAAAGTCTTCTTGTATATAGTTGGAGACTTTGGTGTGAAGGAAAAAGTTTGGAACTGTTAGATCCGACACTAAAAGAGACATACATAGCCAATGAAGTTATGAAGTGCATACACATTGGTTTGTTGTGTGTTCAAGAAGATGCAATAGATAGACCAACAATGTCCACAGTTGTTGTCATGCTGGCAAGTAACATAATGGCACTTCCCAATCCTAGTCATCCTGCATTTTCAGTTGGAAGAAGGATCAATGAAGAAGAATCAACATCGAAAGCTTCCAAGGATGCTTCTGTTAATAATGTAACAGTATCAAGTATTTTACCTAGGTAA 1980 0.3929 MMEPKLTLILRFLGFLILFTIASGQSPNYVGDDCQHSTERNLTTTYQTNLKQVLLWMSSDSTTSQGYNQTSIGTNTTDAIYGLYDCRGDVKGSFCQFCISTAASEILQRCPNRSSAIIWYNFCTVRYSNHDYSGDLITTPSWEILGSKNITSSDELQKAENYMQSLIKEATVETNKLYAMGEFNLSNSEQRYGLVQCNRDISNEECSQCLEDVLDKVSQCCGTKVGWQVLVPSCLMKYDDFMFYLTTDQSPSPLPNPANQGGTSKSKTVIIIIVCVLVALALLSCCIYYLWWQYKSNKGGLISETTPLSFHDHVQREDSLNADLPTIPLIWIRQSTDNFSESCKLGEGGFGLVYKGNLEDGTEIAVKRLSKTFGTGQGLEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKMLVYEYMPNSSLDYHLFNEEKRKQLDWKLRSSIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDQEMNPKISDFGLARAFEKGQSQENTKRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGQRNSGFYNSEHGQSLLVYSWRLWCEGKSLELLDPTLKETYIANEVMKCIHIGLLCVQEDAIDRPTMSTVVVMLASNIMALPNPSHPAFSVGRRINEEESTSKASKDASVNNVTVSSILPR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02179 659 ProSiteProfiles Protein kinase domain profile. 339 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02179 659 FunFam Liguleless narrow1 417 620 - -
Rops7g02179 659 FunFam Cysteine-rich receptor-like protein kinase 10 141 243 - -
Rops7g02179 659 Gene3D Transferase(Phosphotransferase) domain 1 417 619 - -
Rops7g02179 659 Pfam Domain of unknown function (DUF3403) 614 659 IPR021820 GO:0004674
Rops7g02179 659 Gene3D Phosphorylase Kinase; domain 1 304 416 - -
Rops7g02179 659 Gene3D - 28 132 IPR038408 -
Rops7g02179 659 Gene3D - 141 243 IPR038408 -
Rops7g02179 659 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 305 416 - -
Rops7g02179 659 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 654 - -
Rops7g02179 659 SMART serkin_6 339 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02179 659 FunFam Cysteine-rich receptor-like protein kinase 28 30 131 - -
Rops7g02179 659 ProSiteProfiles Gnk2-homologous domain profile. 28 132 IPR002902 -
Rops7g02179 659 CDD STKc_IRAK 345 612 - -
Rops7g02179 659 Pfam Protein tyrosine and serine/threonine kinase 343 610 IPR001245 GO:0004672|GO:0006468
Rops7g02179 659 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Rops7g02179 659 SUPERFAMILY Protein kinase-like (PK-like) 324 629 IPR011009 -
Rops7g02179 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Rops7g02179 659 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Rops7g02179 659 Pfam Salt stress response/antifungal 158 239 IPR002902 -
Rops7g02179 659 Pfam Salt stress response/antifungal 34 129 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02179 Rops-Chr7 37250885 37257125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02179 15 659 Receptor kinase-like Gene Family AT4G05200 41.902 1.02e-178 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02179 PK_Tyr_Ser-Thr 4.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02179 - - mtr:25490357 915.22