Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02174 ATGATGGAACCAAAACTAACTTTGATCCTTAGATTTCTTGGCTTCTTGATCCTTTTCACCATAGCAAGTGCACAATCCGCAAACTATGTAGGTGATGACTGCCAGAATTCAACAGAAAGAAACCTCACCACTACATACCAAACCAACCTTAACCAAGTCCTCTCTTGGATTTCCTCTGATGCTACCACAAGCCAGGGATATAACCACACCAGCATAGGAACCAACACAACTGATGCAATCTATGGTCTCTATGATTGCAGGGGTGATGTCAAAGGATCTTTCTGCCAATTCTGTGTCTCAACTGCAGCCTCAGAAATTCTTCAACGTTGTCCTAACAGATCCTCTGCTGTTATATGGTACAACTTCTGCACTGTTAGGTACTCCAACCATGATTACTTTGGGGACCTTATCACAACCCCATCATGGGAAATTTTGGGGTCAAAGAACATCACTAGTTCGGATGAACTTCAGAAAGCTGAGAATTATATGCAAAGTTTGATAAAAGAGGCTACTGTGGACACCAACAAGTTGTATGCAATGGGTGAGTTCAATTTGAGCAATTCTGAACAAAGATATGGGTTGGTGCAGTGCAGTAGGGACATTAGTAATGAAGATTGTAGCCAGTGTTTGGAGGATATGTTAGACAAAGTTTCTCAATGCTGTGGGACAAAGGTGGAATGGCAGGTTTTGGTTCCCAGCTGTCTAATGAAGTATGATGATTTCATGTTCTACCTCACTACTGATCAATCACCTTCTCCTTTGCCTAATCCAGGTGGACTTCTATCAGAGACCATTCCTCTATCCTTTCATGACCATGTTCAAAGAGAGGATTCACTGAATTCAGACCTTCCTACAATCCCTTTAATTTGGATTCGACAGAGTACTGATAATTTTTCAGAGTCTTGTAAATTAGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGTAATTTAGAAGATGGAACAGAAATTGCTGCCAAAAGACTCTCTAAAACATCTGGATCTGGTCAAGGTTTGGAAGAGTTCAAGAATGAAGTCATCTTTATAGCCAAACTGCAACATAGGAACCTTGTGAGACTCTTGGGTTGCTGCATTGAGGAAAATGAAAAGATGCTTGTATATGAGTACATGCCAAATTCTAGCCTTGACTATCATCTGTTCAATGAGGAAAAACAAAAGCAACTAGATTGGAAGTTAAGATTGAGTATTATTAATGGAATTGCAAAAGGACTATTGTACCTTCATGAAGACTCTAGACTTAGAATAATCCACAGAGATTTGAAAGCAAGCAATGTTCTTTTGGATCAAGAGATGAATCCAAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAGAAAGGCCAGAGTCAAGAAAATACAAAAAGAGTTATGGGCACCTATGGATACATGGCTCCAGAATATGCTATGGAAGGATTATATTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTTTATTAGAAATAATTTGTGGGCAAAGGAATAGCGGATTCTATGATTCAGAACATGGTCAAAGTCTTCTTGTATATAGTTGGAGACTTTGGTGTGAAGGAAAAAGTTTGGAACTGTTAGATCCGATACTAAAAGAGACATACATAGCCAATGAAGTTATGAAGTGCATACACATTGGTTTGTTGTGTGTTCAAGAAGATGCAATAGATAGACCAACCATGTCCACTGTTGTTGTCATGCTGGCAAGTAACACAATGGCACTTCCCAATCCGAATCATCCTGCATTTTCAGTTGGAAGAAGGATCAAAGAAGAAGAATCAACATCAAAGGCTTCAAAGGATGCTTCTGCTAATAAAGTAACAGTATCAAGTATTTTACCTAGGTGA 1857 0.392 MMEPKLTLILRFLGFLILFTIASAQSANYVGDDCQNSTERNLTTTYQTNLNQVLSWISSDATTSQGYNHTSIGTNTTDAIYGLYDCRGDVKGSFCQFCVSTAASEILQRCPNRSSAVIWYNFCTVRYSNHDYFGDLITTPSWEILGSKNITSSDELQKAENYMQSLIKEATVDTNKLYAMGEFNLSNSEQRYGLVQCSRDISNEDCSQCLEDMLDKVSQCCGTKVEWQVLVPSCLMKYDDFMFYLTTDQSPSPLPNPGGLLSETIPLSFHDHVQREDSLNSDLPTIPLIWIRQSTDNFSESCKLGEGGFGPVYKGNLEDGTEIAAKRLSKTSGSGQGLEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKMLVYEYMPNSSLDYHLFNEEKQKQLDWKLRLSIINGIAKGLLYLHEDSRLRIIHRDLKASNVLLDQEMNPKISDFGLARAFEKGQSQENTKRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGQRNSGFYDSEHGQSLLVYSWRLWCEGKSLELLDPILKETYIANEVMKCIHIGLLCVQEDAIDRPTMSTVVVMLASNTMALPNPNHPAFSVGRRIKEEESTSKASKDASANKVTVSSILPR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02174 618 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 613 - -
Rops7g02174 618 SMART serkin_6 298 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02174 618 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 265 375 - -
Rops7g02174 618 Gene3D - 141 243 IPR038408 -
Rops7g02174 618 Gene3D - 26 132 IPR038408 -
Rops7g02174 618 SUPERFAMILY Protein kinase-like (PK-like) 281 586 IPR011009 -
Rops7g02174 618 CDD STKc_IRAK 304 571 - -
Rops7g02174 618 FunFam Liguleless narrow1 376 579 - -
Rops7g02174 618 Gene3D Transferase(Phosphotransferase) domain 1 376 580 - -
Rops7g02174 618 MobiDBLite consensus disorder prediction 591 618 - -
Rops7g02174 618 MobiDBLite consensus disorder prediction 603 618 - -
Rops7g02174 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Rops7g02174 618 Pfam Domain of unknown function (DUF3403) 573 618 IPR021820 GO:0004674
Rops7g02174 618 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Rops7g02174 618 Pfam Salt stress response/antifungal 158 239 IPR002902 -
Rops7g02174 618 Gene3D Phosphorylase Kinase; domain 1 266 375 - -
Rops7g02174 618 FunFam Cysteine-rich receptor-like protein kinase 28 30 131 - -
Rops7g02174 618 ProSiteProfiles Protein kinase domain profile. 298 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02174 618 Pfam Protein tyrosine and serine/threonine kinase 302 569 IPR001245 GO:0004672|GO:0006468
Rops7g02174 618 ProSiteProfiles Gnk2-homologous domain profile. 28 132 IPR002902 -
Rops7g02174 618 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02174 Rops-Chr7 37045289 37052289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02174 15 615 Receptor kinase-like Gene Family AT4G05200 41.782 5.46e-171 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g02174 PK_Tyr_Ser-Thr 4.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02174 - - mtr:25490357 886.715