Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02133 ATGTCTTCCTTCAAATCTTATGGCAAAGTTGATGAACAAGAGCAAATGATATTGGAAGCAAAGAGGAAAACCCGAAAGAGAATCACAATCATAAGCTTGTCCACAATAATCTTAGCTGGTGTTGTATTTGCTGCTGTGTTTGGAATTGCTAACAACTCACAAGGTGGCAATAATGCTCCTCCTCAATCTGTGACAAATTCAGTGAAGGCTGTTTGTGATGTGACATTGTATAAGGATTCATGTTACAGAAGCCTTGGTTCTGTTGTGGACTCAGGAAATGTGGTTCAGTTGTTCAAGGTATCCATCAAAGTGGCCTTAACTGAAGTGTCCAAAGCAGTTGAGTATTTCAATGAGAAAGGAGTTTTGTTCAAAGGGTTGAATGATAGAAGGACTAAGGGAGCTTTGAAAGATTGCAGGGTTCTTTTGGATCTTGCTGTTGATCATCTGAATAGCTCTTTGACTTCTGGGGAAAGTTCTTCCCTTCTTGATGTTTATGAAGATCTTGAAACATGGTTAAGTGCTGCAGGTACATACCAGCAGACTTGCATTGAAGGCTTTGATGATGCAAAAGAAGCATTGAAGAAAAGTGTATTAAGCTATCTCAAAAATTCTACAGAGTTCACCAGCAACAGTCTTGCTATCACTACATGGATTACCAAGGCTGCAAGCACACTGAACTTGAGGCGATTACTGAGTTTACCTTATCAGAATGAAGCACCAGAATGGCTTCATTCAAAAGACAGGAAGTTGCTTAGAACACAGGATTTGAAATCAAAAGCTCATACTGTTGTGGCCAAAGATGGAAGCGGGAAATATAAAACTATTTCTGAAGCACTTAAACATGTCCCTAATAATAGTAACAAAAGAACTGTGATCTATGTGAAGAAAGGGGTTTACTATGAAAATGTGAGGGTAGAGAAGAACAAATGGAATGTGATGATGATTGGTGATGGTATGACTGCTACAATTGTATCTGGTAGCCGTAACTTTGTGGATGGCACACCAACATTTTCAACTGCAACATTTGAATTTCAGAATGTTGGACCAGGTGCTTCAACAAAGAATAGGGTGAAATGGAAGGGTTTGAGAACCATTACTAGTAAACAAGCTAGCGAGTTTTCAATCAAGGCTTTTCTTCAAGGACACAAATGGATTCCTGCATCAGGTGCCCCATTTAAGTCTGATTTGTGA 1191 0.3921 MSSFKSYGKVDEQEQMILEAKRKTRKRITIISLSTIILAGVVFAAVFGIANNSQGGNNAPPQSVTNSVKAVCDVTLYKDSCYRSLGSVVDSGNVVQLFKVSIKVALTEVSKAVEYFNEKGVLFKGLNDRRTKGALKDCRVLLDLAVDHLNSSLTSGESSSLLDVYEDLETWLSAAGTYQQTCIEGFDDAKEALKKSVLSYLKNSTEFTSNSLAITTWITKAASTLNLRRLLSLPYQNEAPEWLHSKDRKLLRTQDLKSKAHTVVAKDGSGKYKTISEALKHVPNNSNKRTVIYVKKGVYYENVRVEKNKWNVMMIGDGMTATIVSGSRNFVDGTPTFSTATFEFQNVGPGASTKNRVKWKGLRTITSKQASEFSIKAFLQGHKWIPASGAPFKSDL* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02133 396 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 219 IPR035513 -
Rops7g02133 396 Pfam Pectinesterase 343 381 IPR000070 GO:0030599|GO:0042545
Rops7g02133 396 Pfam Pectinesterase 262 342 IPR000070 GO:0030599|GO:0042545
Rops7g02133 396 SMART PMEI_2 63 214 IPR006501 GO:0004857
Rops7g02133 396 NCBIfam pectinesterase inhibitor domain 53 218 IPR006501 GO:0004857
Rops7g02133 396 CDD PMEI-like_3 70 220 - -
Rops7g02133 396 PANTHER PECTINESTERASE 343 386 - -
Rops7g02133 396 SUPERFAMILY Pectin lyase-like 343 393 IPR011050 -
Rops7g02133 396 FunFam Pectinesterase 64 219 - -
Rops7g02133 396 Gene3D - 345 396 IPR012334 -
Rops7g02133 396 SUPERFAMILY Pectin lyase-like 258 343 IPR011050 -
Rops7g02133 396 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 219 IPR035513 -
Rops7g02133 396 Pfam Plant invertase/pectin methylesterase inhibitor 67 214 IPR006501 GO:0004857
Rops7g02133 396 Gene3D - 256 344 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02133 Rops-Chr7 35999007 36001851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02133 343 396 Carbohydrate Esterase AT3G10710 57.407 6.81e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02133 - - gmx:100811152 496.508