Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02131 ATGTCAATAATGTCAACAGTTTCTGTTTACCCATTTTTGTGGGATAAGATTGTGTTTATGGCCCTTCTTTTTTGCTTTGCACATGGCTTGCTTAAAAGTACCCTTGAAATCATCAAACAGAAAGCTGTTCTCATCATGGATATAGATCTTAGGTTACCTTCTGGTGAGCATGATAAAGAAGATGAAGAAACAACTACAATTGATAACATGTTGGACAGTGAAGAAAAAATGCATAATGGAGGTATAGATGGTAGAAATATGGTTGATTCTGCTATTGTGGTGCATGCTCTAAATGGTGGAGATTTGAATTCGCCCACAGTTGATATGGCAATGTTTAAGGAAGATACAAATCTTGAGCCACTTTCTGGCATGGAGTTTGAGTCTCACGGGGAAGCTTATTCTTTCTACCAAGAATATGCTCGGTCAATGGGATTCAACACTGCAATACAAAATAGTCGCCGTTCAAAAACATCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACAAAACGAGAGTATGACAAATCATTTAATCGACCACGTGCACGACAGAACAAGCAAGATTCTGAAAATTCAACTGGTCGAAGATCTTGTTCCAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGGCAGATGGGAAATGGGTTATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCTCAAGCGGTTAGTGAACAAACAAGAAGAATGTATGCTGCAATGGCTAGGCAGTTTGCTGAATACAAAACTGTGGTTGGTCTCAAGAATGAGAAGAATCCATTTGATAAAGGTCGGAATTTGGGCCTGGAGTTAGGGGAGTCTAAACTTATGCTTGATTTTTTTGTACAGATGCAAAATATGAATTCTAACTTCTTTTATGCAGTAGACCTTGGTGAGGATCATCGAGTGAAAAATCTTTTATGGATTGATGCTAAAAGTAGGCATGACTATATCAACTTTTGTGATGTGGTGTCATTTGATACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTGAACCAGCACTACCAATTTATATTACTTGGGTGTGCCTTGATATCAGATGAAAGTGCCACAACTTTTTCTTGGCTTTTACGGACGTGGCTGAAAGGAGTTGGTGGTCAAGTTCCGAAAGTGATAATTACTGACCATGACAAGACTTTGAAGTCAGTTATTTCAGATATCTTTCCTAACTCTTGTCATTGTGTTTGCTTATGGCATATATTGGGGAAGGTATCTGAAAATTTAGCTCCTGTAATTAAAAAACATGAGAATTTTATGGCAAAATTTGAAAAATGCATATTTAGGTCGTTGACCAGTGATGATTTTGAAAAAAGATGGTGGAAACTTCTTGATAGATTTGAACTTCGAGAAGATGAATGCATGCAGTCATTGTATGAAGATCGCAAGTTATGGGTACCAACATTCATGAAGGATGTTTTCTTAGGTGGTATGTCTACTGCCCAGCGATCTGAAAGTGTGAATTCCTTCTTTGACAAATATGTTCATAAGAAGACCTCTGTGCAAGATTTTGTAAAACAGTATGAAGCAATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAATATTAAAAACTCCTTCACCTTTAGAGAAGAGTGTTGCAGGGATTTGCACGCATGCTGTATTCAAGAAGATTCAAGCTGAGATTGTTGGTGCAGTTGCTTGTCATCCTAAAGCTGACAGGCAGAATGAGACAACCGTTGTTCACAGGGTTCATGATATGGAGACAAATAAAGACTTTATTGTTGTGGTGAATGAAGTAAAATCAGAGGTGTCTTGTGTTTGTCGGTTATTTGAATATAAAGGTTATTTATGTCGACATGCATTGGTGGTTCTTCAATATTCTGGCCATTCAGTGTTCCCATCTCAATATATTTTGAAACGGTGGACAAAAGATGCAAAAGTCAGGAATATAATGGGAGAAGAATCTGAACATATGCTAGCAAGGGTGCAAAGATACAATGATTTATGTCACCGAGCACTAAAACTGAGTGAAGAGGGATCATTGTCTCAAGAGGGTTACAGTATTGCAGTCCATGCACTACATGAGGCACACAAAAGTTGTGTGACTGTTAACAATTCTAGTAAGAGTCCTACAGAAGCTGGCACATCAGGGGCTCATGGTCAGGTTTGCACTGAAGAAGATACCCAAAGTAGAAGTATGGGCAAGTCGAACAAAAAGAAGAATCCACCTAAAAAGAAAAAGGTGAACTCTGAGGCAGAAGTGATGCCTGTTGGGGCACTAGACAACTTACAGCAAATGGACAAATTCAACACAAGAGCTGCAGTGACACTTGAAGGTTATTATGGCACACAACAGAGTGTGCAGGGAATGTTGAACTTAATGGGACCAACACGGGATGATTACTACGGGAATCAACAGACTCTTCAGGGGCTGGGACCAATAAGTTCCATACCAACCAGCCACGATGGTTATTATGGTGCACATCAGAGCATGCCTGGTCTGGCCCAACTGGATTTTTTGCGAACTGGTTTCACATATGGCATTCGGGATGATCCTAATGTGAGAGCAGCACAGTTGCATGAGGATCCATCAAGGCTGGGAAAACGAGGACTGTGA 2679 0.3938 MSIMSTVSVYPFLWDKIVFMALLFCFAHGLLKSTLEIIKQKAVLIMDIDLRLPSGEHDKEDEETTTIDNMLDSEEKMHNGGIDGRNMVDSAIVVHALNGGDLNSPTVDMAMFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQDSENSTGRRSCSKTDCKASMHVKRRADGKWVIHSFVKEHNHELLPAQAVSEQTRRMYAAMARQFAEYKTVVGLKNEKNPFDKGRNLGLELGESKLMLDFFVQMQNMNSNFFYAVDLGEDHRVKNLLWIDAKSRHDYINFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDESATTFSWLLRTWLKGVGGQVPKVIITDHDKTLKSVISDIFPNSCHCVCLWHILGKVSENLAPVIKKHENFMAKFEKCIFRSLTSDDFEKRWWKLLDRFELREDECMQSLYEDRKLWVPTFMKDVFLGGMSTAQRSESVNSFFDKYVHKKTSVQDFVKQYEAILQDRYEEEAKADSDTWNKVAILKTPSPLEKSVAGICTHAVFKKIQAEIVGAVACHPKADRQNETTVVHRVHDMETNKDFIVVVNEVKSEVSCVCRLFEYKGYLCRHALVVLQYSGHSVFPSQYILKRWTKDAKVRNIMGEESEHMLARVQRYNDLCHRALKLSEEGSLSQEGYSIAVHALHEAHKSCVTVNNSSKSPTEAGTSGAHGQVCTEEDTQSRSMGKSNKKKNPPKKKKVNSEAEVMPVGALDNLQQMDKFNTRAAVTLEGYYGTQQSVQGMLNLMGPTRDDYYGNQQTLQGLGPISSIPTSHDGYYGAHQSMPGLAQLDFLRTGFTYGIRDDPNVRAAQLHEDPSRLGKRGL* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02131 892 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 113 722 IPR031052 GO:0006355
Rops7g02131 892 MobiDBLite consensus disorder prediction 724 751 - -
Rops7g02131 892 Pfam MULE transposase domain 333 425 IPR018289 -
Rops7g02131 892 Pfam SWIM zinc finger 620 647 IPR007527 GO:0008270
Rops7g02131 892 MobiDBLite consensus disorder prediction 724 774 - -
Rops7g02131 892 ProSiteProfiles Zinc finger SWIM-type profile. 613 649 IPR007527 GO:0008270
Rops7g02131 892 SMART 26again6 624 651 IPR006564 GO:0008270
Rops7g02131 892 Pfam FAR1 DNA-binding domain 134 236 IPR004330 -
Rops7g02131 892 MobiDBLite consensus disorder prediction 177 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02131 Rops-Chr7 35941972 35945790 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops7g02131 FAR1 3.7e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02131 - - gmx:100817034 1589.32