Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02129 ATGGATTCCTCAAGGACTGCTGAATTTGAAACACTGCCGCTGCCACCACAGAACATTCCTCAAAATGTTATTCTTGGGAAAGCAGAATCTGAAAAAGTACATGAGCCAATGAAGAAGACAACCATTATAAAACGCTTGCCTGTAGCTAGGAGTGGTATTGGAACCAAGGGACAAAAGATACAGCTCTTAGCTAACCATTTTAGAGTTGGAGTGAGCAAGACTGATGGCTACTTCTATCACTATAATGTTGCTATGTCTCATGAAGATGGGCACCCTGTTGAAGCCAAGGGTGTTGGGAGAAAGGTCATAGACAAACTTTGTGAAACATATGATGTATTGCAAAACAAGAATTTTGCATATGATGGTGAGAAAAGCTTGTTCACGGTTGGTTCTCTGCCACATAATAAGCAGGAATTTGTTGTTGTGTTGGAGGAAGTTTCATCAAAGAGGATTGGAATGAATGGAAGCCCTGCCAGCCCTGAAGAAGGAGGTCCCAAGAGAATGAGGCGTAAATCTCAGTCCAAAACTATTAAGGTGGAGATCAATTATGCAGCCAAAATTCCAATGCAAGCAATTGCAAATGCATTATCTGGTCAGGATTCTGATCACTTCCAGGAAGCATTGAGGGTTCTGGATATTATACTGAGGCAGCATGCAGCAAATCAGGGATGTCTCCTTGTTCGTCAATCTTTCTTTCATGACAGTCCAAGGAATTATACTGATCTAGGAGGTGGTGTTCAAGGTTGTCGTGGTTTCCATTCAAGCTTCAGAGCCACACAAGGGGGTTTATCTCTGAATATGGATGTGTCAACTACCATGCTTGTCAAGCCTGGCCCTGTAGTGGACTTCCTTTTACTGAATCAGAATGTCCAACAACCTGACTTAATTGATTGGACCAAGGCAAAGAGAATGCTGAAAAGCCTCAGAATAAAGGCTAATAATATTGAGTACAAAATCACCGGACTGAGTGATAAGCCTTGTAGGACACAGATGTTTTTATTTAAACATGGAAAGGATGAGTATGGTGAAGCACTGTCCAGTGAAATCACAATTTATGATTACTTTAAAGACCATAAAAAGATTGAATTGCGTTATTCTGCTGATATGCCATGCATCAATGTTGGCAAACCAAAGCGCCCGACTTATTTTCCTGTGGAGCTGTGCACGTTGGTCTCATTGCAACGGTACACCAAGGCTCTAACAAATTTACAAAGGGCTCAGCTGGTGGAAAAGTCAAGGCAAAAGCCCCATGAAAGGAAAGCAGCTCTGCTAGAGTCCTTAAGAAGCAGCAGATATGGTAATGAGCCTATGCTTCAAGCTTCTGGGATCACCATTGAACCAAACTTTACTCCAGTTGAAGGTCGTATTTTGCAAGCTCCAAGGCTTGTAGTTGGAAGAGGGGAGAACTTTTTTCCCCGAAATGGACGTTGGAATTTTAACAATAAGAATCTATTTGAACCTGTGAAGATTGAGCGTTGGGCCATTGTAAACTTCTCAGCTCGGTGTGATATACGATACCTTTGCAATACCATTAAGAAGTGTGCTGAAATGAAAGGGATGCACTTAAATCCTCCATTCCACGTATTTGAAGAGGATGGTCGCTTCAGGCGTGAGCCAGCACCTGTCAGGGTTGAAAAAATGTATGGAATGGTAAAGGCCAAGCTGCCTGGTCCCCCTCAGTTTCTGTTGTGTATTCTTCCAGAGAAAAAGAATTCCGAGCTTTATGGTCCTTGGAAAAAGAGAAATCTTGCTGATGAAGGGGTTGCAACACAATGTATTGCACCAACAAAAATTAATGATCAATACATTACCAATGTTCTCTTGAAAATCAATGCAAAGCTTGGTGGGATGAATTCCTTTCTGTCAATAGAGGATGCACGTTCCATACCTTTAGTTTCTCAGGTACCCACCTTGATTCTTGGTATGGATGTTTCACATGGATCTCCAGGCCGATCAGATGTGCCATCTATTGCTGCGGTTGTGAGCTCAAGATGTTGGCCTCAAATCTCTCGTTATAGAGCTGCCATTCGCACTCAGTCATCCAAGGTAGAGATGATTGCATCTCTATTCAAGCCTGTTTCTGATACACAAGATGATGGTATCATCAGGGAGCTGCTCATGGACTTCCACAATACTTCAGGAAATAGGAAGCCTCAACAAATTATAATCTTCAGGGATGGAGTGAGTGAATCACAGTTTAACCAGGTTCTGAATATTGAATTGGATGAAATTATCAAGGCATGCAAACATCTTGATGAAAGGTGGGATCCAAAGATCACTTTGATTGTTGCACAGAAGAATCATCACACTAGGTTCTTCCAGGCTAATGCTCAAGAAAACGTTCCACCTGGGACTGTTATTGACAACAGTATATCTCATCCCAGAAACAATGACTTCTACATGTGTGCGCATGCAGGGATGATTGGTACAAGTCGACCTACTCATTATCATGTTTTACATGATGAAATCGGGTTCTCAGCTGATGATTTGCAAGAACTAGTGCATTCTTTATCTTATGTATATCAAAGGAGCACAACTGCCATATCAGTTGTTGCCCCCATTTGCTATGCCCACTTGGCAGCTGCCCAGATGGCACAATTTATGAAGTTTGATGATTTTTCTGAGAGTTCTTCCAGCCATGGTGGACTGACATCTGTTAGTTTACCTCAAGTACCTCAGTTACCCCTTCTTCACAAAGATGTCACTAATTCAATGTTCTTTTGTTAA 2727 0.4188 MDSSRTAEFETLPLPPQNIPQNVILGKAESEKVHEPMKKTTIIKRLPVARSGIGTKGQKIQLLANHFRVGVSKTDGYFYHYNVAMSHEDGHPVEAKGVGRKVIDKLCETYDVLQNKNFAYDGEKSLFTVGSLPHNKQEFVVVLEEVSSKRIGMNGSPASPEEGGPKRMRRKSQSKTIKVEINYAAKIPMQAIANALSGQDSDHFQEALRVLDIILRQHAANQGCLLVRQSFFHDSPRNYTDLGGGVQGCRGFHSSFRATQGGLSLNMDVSTTMLVKPGPVVDFLLLNQNVQQPDLIDWTKAKRMLKSLRIKANNIEYKITGLSDKPCRTQMFLFKHGKDEYGEALSSEITIYDYFKDHKKIELRYSADMPCINVGKPKRPTYFPVELCTLVSLQRYTKALTNLQRAQLVEKSRQKPHERKAALLESLRSSRYGNEPMLQASGITIEPNFTPVEGRILQAPRLVVGRGENFFPRNGRWNFNNKNLFEPVKIERWAIVNFSARCDIRYLCNTIKKCAEMKGMHLNPPFHVFEEDGRFRREPAPVRVEKMYGMVKAKLPGPPQFLLCILPEKKNSELYGPWKKRNLADEGVATQCIAPTKINDQYITNVLLKINAKLGGMNSFLSIEDARSIPLVSQVPTLILGMDVSHGSPGRSDVPSIAAVVSSRCWPQISRYRAAIRTQSSKVEMIASLFKPVSDTQDDGIIRELLMDFHNTSGNRKPQQIIIFRDGVSESQFNQVLNIELDEIIKACKHLDERWDPKITLIVAQKNHHTRFFQANAQENVPPGTVIDNSISHPRNNDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQMAQFMKFDDFSESSSSHGGLTSVSLPQVPQLPLLHKDVTNSMFFC* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02129 908 MobiDBLite consensus disorder prediction 151 173 - -
Rops7g02129 908 Pfam PAZ domain 281 408 IPR003100 GO:0005515
Rops7g02129 908 CDD PAZ_argonaute_like 277 391 - -
Rops7g02129 908 ProSiteProfiles PAZ domain profile. 317 392 IPR003100 GO:0005515
Rops7g02129 908 Pfam Argonaute linker 1 domain 227 275 IPR014811 -
Rops7g02129 908 Pfam N-terminal domain of argonaute 58 215 IPR032474 -
Rops7g02129 908 CDD Piwi_ago-like 436 863 IPR045246 -
Rops7g02129 908 Gene3D - 456 622 - -
Rops7g02129 908 SMART Piwi_a_2 561 869 IPR003165 GO:0003676
Rops7g02129 908 ProSiteProfiles Piwi domain profile. 561 869 IPR003165 GO:0003676
Rops7g02129 908 Pfam Piwi domain 562 869 IPR003165 GO:0003676
Rops7g02129 908 FunFam Protein argonaute 7 272 396 - -
Rops7g02129 908 Gene3D - 628 908 IPR036397 GO:0003676
Rops7g02129 908 Pfam Argonaute linker 2 domain 418 462 IPR032472 -
Rops7g02129 908 FunFam Protein argonaute 3 629 908 - -
Rops7g02129 908 SUPERFAMILY Ribonuclease H-like 546 867 IPR012337 -
Rops7g02129 908 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 41 871 - -
Rops7g02129 908 SMART DUF1785_2 225 277 IPR014811 -
Rops7g02129 908 SUPERFAMILY PAZ domain 272 431 IPR036085 GO:0005515
Rops7g02129 908 Pfam Mid domain of argonaute 472 523 IPR032473 -
Rops7g02129 908 Gene3D paz domain 271 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02129 Rops-Chr7 35922756 35928179 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02129 50 908 Eukaryotic Initiation Factors Gene Family AT5G43810 36.040 1.55e-167 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02129 K11593 - aew:130767408 1293.1