Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02126 ATGGCTTCCTCATCGACCAACAAATCTGCTGAATTTGAATCACCACTGAACATTCCTCAAACATCTAATATAAAACGTTTGCCTATAGCTAGGAGAGGTATTGGCTCCAAGGGAAACAAGATAGAGCTCTTGGCTAACCATTTTAGAGTTGGTATGAGCAAGAATGATGGCTACTTCTATCATTATAGTGTTGCCTTTCGTTATGAAGATGGGAACCCTGTTGAAGCAAAAGGTGTTGGGAGAAAGGTCATAGATAAACTTTGCGAAACATATGGTGTATTAAAAGACAAGAATTTTGCCTATGATGGTGAGAAAAGCTTGTTCACTGTTGATCCTCCACCACAAAATAAGCAAGAATTTGATGTTTTGTTGGAGGAAGTTTCATCAAACAGGCCTGGAAGGATTGAAAGCCCTATTGAAAGAGACACCAAGAGAATGAAGCGTCAATATCAGTCCAAAACTATTAAGGCGGAGATCAGTTATGCAGCCAAAATTCCAATGCAAGCAATTACAAATGCATTACGTGGTCAGGATTCTGAGCACTTCCAAGAAGCGTTGAGGGTTCTGGATATTATACTGAGGCAGCATGCAGCAAATCAGGGATGTCTCCTTGTTCGCCAATCTTTCTTCCATGACAATCCAAGTAATTATTTTGATATAGGAGGTGGTGTTCAAGGTTGTCGTGGTTTTCACTCAAGCTTCCGAGCCACACAAGGGGGTTTATCTCTGAATATTGATGTGTCAAACACAATGCTTGTAAAGCCTGGACCTGTGGAGGACTTCCTTTTACTGAATCAGAATGTCCAACACCGAAAATTTATTGATTGGACCAAGGCAAAGAGAATGCTGAAAAACCTCAGAATAAAGGCTAATAATATTGAATACAAAATCACTGGACTGAGTGATATGCCCTGTAGGACACAGACATTTTTGTTGAAACATGGGAAGGATGCTAACGGTGAAGTGCAGACAAGCGAAATCACTGTTTATGATTACTTTAAACACCATAAAAATATTGAACTGCGTTATTCTGCTGATATGCCATGCATCAATGTTGGCAAACCAAAGCGCCCTTGTTATTTTCCTGTGGAGCTATGCACGATGGTCTCATTGCAGCGTTATACCAAGGCATTGACAAATTTGCAAAGGACTCAGCTGGTGGAGAAGTCAAGGAAAAAGCCCCATGAAAGGAAAGCAGCTTTGCTAGATTCCTTAAGAAACAGCAGATATGGTAATGATCCCATGCTTTGTTCTTCTCGGATTACCATTCAACCCAACTTTACTCAAGTGGAAGGCCGTATTCTTGAAGCTCCAAAGCTTGTAGTTGGAAGGAGGGAGAACATTTTTCCCCGGAATGGGCGTTGGAATTTCAACAATAAGAGACTAGTTGATCCAGTAAGGATTGAGCGTTGGGCCATTGTAAACTTCTCAGCTCAGTGTAACACACGACACTTGTGCGATACCCTTATGAATTGTGCTGAAATGAAAGGGATGCGCTTAAATCCTCCACTCCGCATATTTGAAGAGGAAAGTCGCTTCAGGCATGATCCAGCACATGTCAGGGTTGACAAAATGTATGGAATTTTAAAGGCCAAGCCTTTGCAGCCCCCTGTTCAGCTTCTGTTGTGTATTCTTCCAGAGAGAAAGAATTCCGAGCTTTATGGTCCTTGGAAAAGGAGAATTCTTGTTGATGAAGGGGTTGCAACACAATGTATTGCGCCAACAAGAATTTATGATCAGTACATTACTAATGTTCTCTTGAAAATTAATGCAAAGCTTGGCGGGATGAATTCCTATCTGTCAAAAGAGGATGCAAATTCCATACCTTTAGTTTCTCATGTACCCACCTTGATTCTTGGAATGGATGTTTCACATGGATCTCCAGGCCGATCAGATGTGCCATCTATTGCTGCAGTTGTGAGCTCAAGATATTGGCCTCAAATTTCTCGTTATAGAGCTGCAGTTCGCACTCAATCACCCAAAGTAGAGATGATTGCATCTTTATTCAAGCCTGGTTCTGATACCAAGGATGATGGTATCATCAGGGAACTGCTTGAAGACTTCCAAAAAACTTCAAGAGATAGGAAGCCTCAACAAATTATAATTTTCAGGGATGGAGTGAGTGAATCACAGTTCAACCAGGTCCTGAACATTGAATTGGATGAAATCATTAAGGCATGCCAACATTTTGATAAAAAGTGGAATCCAAAGTTCACTTTAATTGTTGCACAAAAGAATCATCATACTAGGTTCTTCCAGACCCGTGCTCAAGAACAAAATGTTCCACCTGGAACTGTTATTGACAACAAAATATGTCATCCCAAAAATAATGACTTCTACATGTGTGCTCATGCTGGAATGATTGGTACAACTCGACCTACTCATTACCATGTTTTACATGATGAAATTGGGTTCTCAGCAGATGATTTGCAAGAACTAGTGCATTCTCTATCTTATGCTTATCAAAGGAGCACAACTGCCATATCAGTAGTTGCCCCCGTTTGCTATGCCCACTTGGCAGCTGCCCAAATGGCACAATTTATCAAGTTTGATGATTTTTCTGAGAGTTCTTCCAGCCATGGTGGACTAACATCTGTTGGTGTACCTCAAGTACCTCAATTACCACGTCTTCACAAAGATGTCACCAACTCCATGTTCTTTTGTTAA 2667 0.4091 MASSSTNKSAEFESPLNIPQTSNIKRLPIARRGIGSKGNKIELLANHFRVGMSKNDGYFYHYSVAFRYEDGNPVEAKGVGRKVIDKLCETYGVLKDKNFAYDGEKSLFTVDPPPQNKQEFDVLLEEVSSNRPGRIESPIERDTKRMKRQYQSKTIKAEISYAAKIPMQAITNALRGQDSEHFQEALRVLDIILRQHAANQGCLLVRQSFFHDNPSNYFDIGGGVQGCRGFHSSFRATQGGLSLNIDVSNTMLVKPGPVEDFLLLNQNVQHRKFIDWTKAKRMLKNLRIKANNIEYKITGLSDMPCRTQTFLLKHGKDANGEVQTSEITVYDYFKHHKNIELRYSADMPCINVGKPKRPCYFPVELCTMVSLQRYTKALTNLQRTQLVEKSRKKPHERKAALLDSLRNSRYGNDPMLCSSRITIQPNFTQVEGRILEAPKLVVGRRENIFPRNGRWNFNNKRLVDPVRIERWAIVNFSAQCNTRHLCDTLMNCAEMKGMRLNPPLRIFEEESRFRHDPAHVRVDKMYGILKAKPLQPPVQLLLCILPERKNSELYGPWKRRILVDEGVATQCIAPTRIYDQYITNVLLKINAKLGGMNSYLSKEDANSIPLVSHVPTLILGMDVSHGSPGRSDVPSIAAVVSSRYWPQISRYRAAVRTQSPKVEMIASLFKPGSDTKDDGIIRELLEDFQKTSRDRKPQQIIIFRDGVSESQFNQVLNIELDEIIKACQHFDKKWNPKFTLIVAQKNHHTRFFQTRAQEQNVPPGTVIDNKICHPKNNDFYMCAHAGMIGTTRPTHYHVLHDEIGFSADDLQELVHSLSYAYQRSTTAISVVAPVCYAHLAAAQMAQFIKFDDFSESSSSHGGLTSVGVPQVPQLPRLHKDVTNSMFFC* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02126 888 Gene3D paz domain 249 374 - -
Rops7g02126 888 SMART DUF1785_2 203 255 IPR014811 -
Rops7g02126 888 SMART Piwi_a_2 540 849 IPR003165 GO:0003676
Rops7g02126 888 Pfam Mid domain of argonaute 450 501 IPR032473 -
Rops7g02126 888 FunFam Protein argonaute 3 608 888 - -
Rops7g02126 888 Pfam Piwi domain 541 849 IPR003165 GO:0003676
Rops7g02126 888 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 28 851 - -
Rops7g02126 888 Pfam Argonaute linker 2 domain 396 440 IPR032472 -
Rops7g02126 888 Pfam Argonaute linker 1 domain 205 253 IPR014811 -
Rops7g02126 888 CDD Piwi_ago-like 421 843 IPR045246 -
Rops7g02126 888 Pfam PAZ domain 260 386 IPR003100 GO:0005515
Rops7g02126 888 CDD PAZ_argonaute_like 255 369 - -
Rops7g02126 888 SUPERFAMILY PAZ domain 250 410 IPR036085 GO:0005515
Rops7g02126 888 SUPERFAMILY Ribonuclease H-like 534 847 IPR012337 -
Rops7g02126 888 ProSiteProfiles Piwi domain profile. 540 849 IPR003165 GO:0003676
Rops7g02126 888 Gene3D - 434 601 - -
Rops7g02126 888 Pfam N-terminal domain of argonaute 40 193 IPR032474 -
Rops7g02126 888 ProSiteProfiles PAZ domain profile. 295 370 IPR003100 GO:0005515
Rops7g02126 888 Gene3D - 607 888 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02126 Rops-Chr7 35769920 35776298 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02126 31 888 Eukaryotic Initiation Factors Gene Family AT5G43810 35.642 7.40e-161 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02126 K11593 - cpap:110818141 1216.83