Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02118 ATGGGGTCTAAGAGGGCACTTTTGATACCATCACCAAGAACTCCAAATGACCAAGAGCCTCCAACCATTCCAGTTTTTCATGAACTACCCAAATCAAATTCAAGTTCCAGCAACACTGTGACATTCTTTGGTGTGGAATCTAGCAACCCAGTTGAGAAAAACTCATCAAAATCATCATCATCACGTAGAAGTGCCATGTCCATTCACTCAAGCAGGAGCAACTCGATCCGTGAAGTGAGTTTCAACCATTCAGGTTCAAAACCTGTTAGGTATGGCTCAAAGGGTGGTGCTGATTCCGAAGGACTCAGCATGTCACAGAAGGAACTCAGAGATGAGGATGCAAGGTTGGTTTATATAAATGATCCGGAGAAGACCAATGAGACTTTTGAATTTGCAGGAAATTCAATCAGAACAGCTAAATACTCCATCCTCACTTTTATTCCAAGGAATCTGTTTGAACAATTCCACAGAGTTGCTTACATATATTTTCTAATAATTATCATTCTCAATCAGCTTCCTATGCTTACAGTGTTTGGGGGTCCTGTTTCCATTTTGCCATTAGCTTTTGTTCTGCTTGTTACAGCCGTTAAGGATGCTTTTGAGGATTGGAGGAGGCACGAGTCTGATAAAGTTGAGAATAACAGGTTAGCATCAGTTTTGGTTAATGATCAATTCATAGAGAAGAAATGGAAGGATATAAGGGTTGGTGAGATCATAAAAATCAATGCAAATGAAACCATTCCTTGTGATATTGTTTTGCTCTCAACTAGTGATCCAACTGGAGTTGCATATGTGCAGACTACTAATCTAGATGGAGAGTCCAATTTGAAGACTAGGTATGCAAAACAAGAGACAGATTCAAAGGTGATTGAGAAGGAGAGGTTTGATGGGTTGATTAAATGTGAGAAACCAAATAGGAACATATATGGATTTCAAGCTACCATGGAAATTGACGGCAAGAAGTTGTCACTTGGATCCTCCAATATTGTCCTTAGAGGATGTGAAGTTAAGAATACTAGTTGGGCACTTGGTGTTGCCGTATATAGTGGCCAAGAGACTAAAGTAATGCTCAACAGTTCTGGAGCTCCATCCAAAAGGAGCAGGCTGGAGATATGCATGAATAACGAAATCATTATGCTCTCTTTCTTTCTTGTGGCATTGTGCACAATCACCTCAGTTTGTGCTGCTGTTTGGTTAAAGCGCCACAAGGATGAGTTGAATCTCTTGCCTTATTATAGGAAACTGGATGTTTCAGGAGAAGAAGTTGACAGCTATGAATACTATGGATGGGGATTGGAAATTTTTTTCACATTCCTCATGTCTGTTATAGTGTTCCAGGTCATGATTCCCATAGCATTGTATATTTCTATGGAGCTTGTTCGTGTTGGTCAGGCCTACTTCATGATCAGAGACAACAGAATGTATGATGAGGCAACAAAGTCAAGATTTCAATGCAGGGCTTTGAACATTAATGAAGACTTGGGGCAGATTAAATATGTGTTCTCAGACAAAACTGGTACACTTACTGAGAACAAGATGGAGTTTCAATGTGCTAGCATCTGGGGGGTAGATTACAGTTCTACAAAAGCCAGCATGGAGGATGAGCAAGTTGAATACTCAGTACAAGTGGATGGAAAGATCCTGAGACCAAAGATGAAGGTGAAAGTTAATCCAGAGCTTTTGCAATTATCAAGAAGTGGACTTGAAAATAAGGAGGGGAAAAGGATTCGTGATTTCTTTCTAGCATTGGCAACCTGCAATACTATTGTGCCTCTTGTTGTTGACACACCTGATCCTGATGTCAAGCTGATAGATTACCAAGGGGAATCACCAGATGAGCAAGCATTAGCATATGCCGCCGCCGCCTATGGTTTTATGCTTATAGAACGAACCTCAGGACATATAGTCATTGATATTCAGGGAGAAAGACAAAAGTTCAATGTCTTGGGTTTGCATGAATTTGACAGTGACAGGAAGAGGATGTCAGTTATATTGGGGTACCCTGACAATTCTGTGAAACTTTTTGTCAAAGGTGCAGATACATCCATGCTTAGTGTGATAGATAAAACATATAACATGGACTTAGTAAGAGCAACTGAAGCTCATCTTCACTCTTACTCTTCACTGGGTTTGAGGACACTTGTTATTGGGATGAGGGACTTGAATGCTTCAGAATTTGAGCAATGGCATGCTGCTTATGAGGCAGCAAACTCTGCTTTGATTGGTAGAGCTGCTTTGCTCAAAAAGGTTTCTAGCAATGTAGAGAACAACATATGCATATTGGGAGCATCTGCTATTGAAGATAAACTACAACAAGGTGTGCCAGAAGCCATTGAGTCTCTAAGGACAGCAGGTATTAAAGTTTGGGTGTTAACTGGGGACAAACAAGAAACTGCCATATCCATTGGTTACTCCTCAAAGCTCTTAACAAGAAACATGACTCAAATTATAATTAATAACAACAATAAAGTGTCATGTAGAAAAAGTTTACAAGATGCACTTGTCATGTCTAAAAAACTCAAGTCCACATCTGGGGTTAACAACAATACTGGAGGAGGAAGTTCTGATGCACTTACAACTCAGATAGCTTTGATTATTGATGGTAGCAGCCTTGTACATATTCTTGACAGTGAGCTTGAAGAGCAGCTATTTGAACTTGCAAGTAAATGTGCCGTTGCTCTCTGTTGTCGAGTGGCTCCACTGCAAAAGGCTGGAATTGTTGCCCTTGTGAAGAATAGTACATCTGACATGACACTAGCCATTGGAGATGGTGCCAATGATGTCTCAATGATTCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGTAGGCAAGCTGTAATGGCATCAGATTTTGCAATGGGGCAGTTCAGATTTTTAGTTCCTCTCTTATTGATACATGGTCACTGGAATTACCAAAGGCTGGGTTACATGATACTATACAATTTTTACAGAAATGCTGTCCTTGTTCTTGTCCTATTCTGGTATGTACTCTTCACCGCCTTCACTTTGACAACTGCTATAAATGAATGGAGCACCACATTGTATTCAATAACCTACAGTTCATTGCCAACTATTATTGTTGGTATTCTTGACAAGGATCTTGGTAGAAGGACTCTCCTAAAGTATCCTCAGCTTTATGGGGCTGGACAGAGAAATGAGGCCTATAACAAAAAGTTATTTTTGTTGACAATGGCTGATACTTTATGGCAAAGTATGGTTATCTTCTGGCCTCCTCTCTTTGCATATTGGAATAGCACTATTGATGTGTCAAGCATCGGAGACCTTTGGACTTTAGCAGTTGTTATTTTGGTTAATTTGCAAATAGCCATGGATGTCACAAGGTGGTATTGGGTGACTCATGTTGTCATTTGGGGGTCTATTGTTGCAACTTTCATTACTGTCATGATCCTTGATGCTGTACCTACACTTCCTGGTTACTGGGCCTTCTTTCATGTTGCACGCACTGGATTGTTCTGGTTATTGTTGCTGGGAATCATAATAGCAGCATTGCTTCCACGTTTGGTTGTAAAATTTGTTTATCAATATTATTTTCCTAATGATATTCAGATTTCTAGAGAAGCTGAGAAAATGGAGCATCAAAGAATAGTTGAAAGAGGGCAGATAGAAATGCTTCCTATCTCAGATACTCCACCAATATAA 3669 0.4007 MGSKRALLIPSPRTPNDQEPPTIPVFHELPKSNSSSSNTVTFFGVESSNPVEKNSSKSSSSRRSAMSIHSSRSNSIREVSFNHSGSKPVRYGSKGGADSEGLSMSQKELRDEDARLVYINDPEKTNETFEFAGNSIRTAKYSILTFIPRNLFEQFHRVAYIYFLIIIILNQLPMLTVFGGPVSILPLAFVLLVTAVKDAFEDWRRHESDKVENNRLASVLVNDQFIEKKWKDIRVGEIIKINANETIPCDIVLLSTSDPTGVAYVQTTNLDGESNLKTRYAKQETDSKVIEKERFDGLIKCEKPNRNIYGFQATMEIDGKKLSLGSSNIVLRGCEVKNTSWALGVAVYSGQETKVMLNSSGAPSKRSRLEICMNNEIIMLSFFLVALCTITSVCAAVWLKRHKDELNLLPYYRKLDVSGEEVDSYEYYGWGLEIFFTFLMSVIVFQVMIPIALYISMELVRVGQAYFMIRDNRMYDEATKSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKASMEDEQVEYSVQVDGKILRPKMKVKVNPELLQLSRSGLENKEGKRIRDFFLALATCNTIVPLVVDTPDPDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIQGERQKFNVLGLHEFDSDRKRMSVILGYPDNSVKLFVKGADTSMLSVIDKTYNMDLVRATEAHLHSYSSLGLRTLVIGMRDLNASEFEQWHAAYEAANSALIGRAALLKKVSSNVENNICILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTRNMTQIIINNNNKVSCRKSLQDALVMSKKLKSTSGVNNNTGGGSSDALTTQIALIIDGSSLVHILDSELEEQLFELASKCAVALCCRVAPLQKAGIVALVKNSTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLFTAFTLTTAINEWSTTLYSITYSSLPTIIVGILDKDLGRRTLLKYPQLYGAGQRNEAYNKKLFLLTMADTLWQSMVIFWPPLFAYWNSTIDVSSIGDLWTLAVVILVNLQIAMDVTRWYWVTHVVIWGSIVATFITVMILDAVPTLPGYWAFFHVARTGLFWLLLLGIIIAALLPRLVVKFVYQYYFPNDIQISREAEKMEHQRIVERGQIEMLPISDTPPI* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02118 1222 CDD P-type_ATPase_APLT_Dnf-like 133 1079 - -
Rops7g02118 1222 MobiDBLite consensus disorder prediction 1 106 - -
Rops7g02118 1222 Pfam Phospholipid-translocating ATPase N-terminal 117 179 IPR032631 -
Rops7g02118 1222 NCBIfam phospholipid-translocating P-type ATPase 131 1196 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Rops7g02118 1222 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 507 773 IPR023299 GO:0000166
Rops7g02118 1222 Pfam Cation transport ATPase (P-type) 605 685 - -
Rops7g02118 1222 SUPERFAMILY Calcium ATPase, transmembrane domain M 131 1188 IPR023298 -
Rops7g02118 1222 NCBIfam HAD-IC family P-type ATPase 892 1007 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops7g02118 1222 NCBIfam HAD-IC family P-type ATPase 433 522 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops7g02118 1222 Gene3D - 757 961 IPR023214 -
Rops7g02118 1222 PRINTS P-type cation-transporting ATPase superfamily signature 921 940 - -
Rops7g02118 1222 PRINTS P-type cation-transporting ATPase superfamily signature 501 515 - -
Rops7g02118 1222 Pfam Phospholipid-translocating P-type ATPase C-terminal 949 1189 IPR032630 -
Rops7g02118 1222 ProSitePatterns E1-E2 ATPases phosphorylation site. 503 509 IPR018303 -
Rops7g02118 1222 SUPERFAMILY Calcium ATPase, transduction domain A 214 356 IPR008250 -
Rops7g02118 1222 Gene3D - 190 358 - -
Rops7g02118 1222 SFLD p-type atpase 485 972 IPR044492 -
Rops7g02118 1222 Gene3D - 606 742 IPR023299 GO:0000166
Rops7g02118 1222 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 104 1201 - -
Rops7g02118 1222 SUPERFAMILY HAD-like 488 962 IPR036412 -
Rops7g02118 1222 MobiDBLite consensus disorder prediction 28 82 - -
Rops7g02118 1222 FunFam Phospholipid-transporting ATPase 757 961 - -
Rops7g02118 1222 FunFam Phospholipid-transporting ATPase 605 738 - -
Rops7g02118 1222 SFLD C1.7: P-type atpase like 485 972 - -
Rops7g02118 1222 Pfam E1-E2 ATPase 217 459 - -
Rops7g02118 1222 FunFam Phospholipid-transporting ATPase 189 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02118 Rops-Chr7 35626327 35633106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02118 70 1220 Primary Pumps ATPases AT5G04930 68.750 0.0 1677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02118 K14802 - gmx:100813982 1913.27