Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02103 ATGCCTTCTTCGCAAGGAAATCGATCTGGGTACAAATTTCCAATCAGGGTTGAAGTTCGTAATGACACTAAGCAGCATCTGCCTGCAATGTTCGTCCATTCTTGCCTGGATTTAAAATTAAACCATGTCATGCTGGAGGTTGAAGATGGGAGAAGCTGGAATATCGGTCTCTACAACATAGAATCAAGGCCTAACCAAGCAAGGTTATCTTCAGGGTGGGTGGACTTTTGTTCTGACTTGGAGTTAAAGCCAGGGGATATCGTCATTCTGAAATTACATGACAAGTCTACCAACCACCTATTAGCCCATATTGAACGTCTTTGA 324 0.429 MPSSQGNRSGYKFPIRVEVRNDTKQHLPAMFVHSCLDLKLNHVMLEVEDGRSWNIGLYNIESRPNQARLSSGWVDFCSDLELKPGDIVILKLHDKSTNHLLAHIERL* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02103 107 CDD B3_DNA 27 106 IPR003340 GO:0003677
Rops7g02103 107 Pfam B3 DNA binding domain 24 104 IPR003340 GO:0003677
Rops7g02103 107 SUPERFAMILY DNA-binding pseudobarrel domain 23 101 IPR015300 -
Rops7g02103 107 Gene3D - 11 105 IPR015300 -
Rops7g02103 107 ProSiteProfiles B3 DNA-binding domain profile. 10 107 IPR003340 GO:0003677
Rops7g02103 107 SMART B3_2 15 106 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02103 Rops-Chr7 35114955 35115997 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Rops7g02103 B3 4.4e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02103 - - hsyr:120140694 58.9214