Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02082 ATGGATAGGATTCAGGAGGCAGATGAAAGTAATAAATCTCAGTGTTCATCATCTTCAGTTGTTGCTCTAGCAATCAAGGGTAACAAGAAAAGCAAATATGTGGTACAGTGGGCACTTAATAAGTTTGTTCCTGAGGGAATGATTAACTTCAAGCTGATACATGTCCATGCTGGTATAAAAGGAGTTCCAACACCATTGGGAAATGTGATACCTCTTTCACAAGTCCGAAATGATGTAGCAATTGCTTTCAGAAAGGAAGTAGAGTGGCAAATAGATCAAATGCTTCTACCTTTTAAGAGAATGTGTGAGCAGAGAAAGGTGCATGTAGATGTTGTAGTGATTGAATCAGATGATGTGGCAACTGCAGTAGCAGAGGAAGTAGCTAAGGGTGCTATAACCAAACTTCTTGTTGGAGCTTCATCTCGTAGCATATTTAAAAGTAAACATAAGGGTATGTCTGCGAAAATCTCAGTATGCACTCCAAGATTTTGTACAGTTTATGCTATTTCAAAAGGAAAATTGTCCATAAGACCATCAGACATGCAGATTGATGGAGGCATTATAGATGACACTAGTGAAACCACCAGTTTTTCCTCCAGCAGCTCATCAAACTACACTTCCACCACTCAGACAGAGTCTGGCTCAGGTGCGTCACTTGCTGCTTTACAATCCTCTTCCCTAGCAACACAGAGATTTCAAGCTCTTTCAAGTATAAATCAGACCCTTCTGAGCACAACTCCTAGTTTAAATGAAACTAATCATTCTAGAGGCCAGTCTCTAGATCTTGGGAGAGACAATGCTGCTACAGTTTCTGCCAGAAACTCAGATATTGACAATGTTCTGAGTCGGGTCTCTAGTTGCAGAAGCCTTATTTCAGATACTGAATCTTGGATTAATGATCAAAATTCTAGCAAGGATGTGCCACTAGCAACTAAACTTCTGTCACCGAATAGGCAGGAAAATTTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCCCAAGGATTGCATGCAGTAGCTCAAAGTGAGAACATTGACGCATCACGAAAGCTGAATGAACTAAGCAAGAGGAGATCAGAAGAATCCATGAAAATGAAGGAGATTATTGCCAAGGAGGAGATGGCCAAAGAATTAGCAAGACAAGAAAATGAGAAATATGAAGCTGCAGCAAAAGAAGCTGCATATTTGAAAGAATGTGCTGAAAGAGAAGCTGCAGAAAAAAAAGAAACGGAGTTAAAAGTTATTCGTGCTGCCAAAGAGAAAGAAAAGCTGGAGGATGCTCTAACTGGTTCCACACCCCAGTACCGGAAGTTTTCATTCGATGAAATAGTTTCAGCTACGTCATCTTTCTCTGAAGCTCTGAAAATTGGAATGGGAGCGTATGGAATGGTGTATAAGTGCACTTTGTATCATACAACTGTTGCTGTTAAAGTTCTTCACCCGAATGGAAACAGCAAAAGCAAGCAATTCCAGCAGGAGTTAGAGATATTGAGCAGAATTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCCTGATCATGGATGCCTTGTGTATGAATATATGGAGAATGGTAACCTGGAGGATAGACTACTTCGAAAAAACAATACTACCCCGATCCCATGGTTTGAGAGGTTTCGAATAGCTTGGGAAGTTGCATCAGCTCTTTCCTTTCTTCACAGCTCAAAGCCGGAACCTATCATCCATCGTGACTTGAAACCGGCAAACATCTTGCTCGGTCGTAACCTTGTCAGCAAGATTGGTGATGTTGGCCTTTCTACAATCCTCCATTCAGAAAATTTAGCTACAATGTATAAGGACACAGAGCCTGTTGGGACACTTTGCTACATAGATCCTGAGTATCAAAGGACTGGGTTAATATCACCAAAATCTGATGTTTATGCTTTTGGAATAGTGATCTTACAGTTATTGACAGCAAAAGCAGCAATAGCACTTCCTCATGTGGTTGAAACAGCAATTGATGGTGGGAATTTAACAGATATATTGGATCCGGAAGCAGGGTCTTGGCCATTACAAGAGACATTAGACTTAGCTCAGTTAGGACTGAGCTGTGCAGAGCTTCGGCATAGAGACCGGCCTGATTTAAAAGATCACGTCCTTCCAACACTCGAGAGATTGAAAGAAGTTGCTGATAGAGTTCAACATTCTGCTTCAACTGTCACTATTAAATCCAGACCTCCTAATCACTTTATCTGTCCAATACTTCAGGATGTGATGGATGATCCTTGTGTTGCCATGGATGGATATACATATGATCGCAAAGCAATTGAAAAGTGGCTTCAAGAGAATGACAAATCACCAATGACAAATATGGCTTTGCCTCATAAGAATCTAATTCCTAATTACACACTTCTGTCAGCAATTTTGGAGTGGAAGTCCAAAGAAAGATGA 2424 0.4064 MDRIQEADESNKSQCSSSSVVALAIKGNKKSKYVVQWALNKFVPEGMINFKLIHVHAGIKGVPTPLGNVIPLSQVRNDVAIAFRKEVEWQIDQMLLPFKRMCEQRKVHVDVVVIESDDVATAVAEEVAKGAITKLLVGASSRSIFKSKHKGMSAKISVCTPRFCTVYAISKGKLSIRPSDMQIDGGIIDDTSETTSFSSSSSSNYTSTTQTESGSGASLAALQSSSLATQRFQALSSINQTLLSTTPSLNETNHSRGQSLDLGRDNAATVSARNSDIDNVLSRVSSCRSLISDTESWINDQNSSKDVPLATKLLSPNRQENFNLELEKLRIELRHAQGLHAVAQSENIDASRKLNELSKRRSEESMKMKEIIAKEEMAKELARQENEKYEAAAKEAAYLKECAEREAAEKKETELKVIRAAKEKEKLEDALTGSTPQYRKFSFDEIVSATSSFSEALKIGMGAYGMVYKCTLYHTTVAVKVLHPNGNSKSKQFQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLRKNNTTPIPWFERFRIAWEVASALSFLHSSKPEPIIHRDLKPANILLGRNLVSKIGDVGLSTILHSENLATMYKDTEPVGTLCYIDPEYQRTGLISPKSDVYAFGIVILQLLTAKAAIALPHVVETAIDGGNLTDILDPEAGSWPLQETLDLAQLGLSCAELRHRDRPDLKDHVLPTLERLKEVADRVQHSASTVTIKSRPPNHFICPILQDVMDDPCVAMDGYTYDRKAIEKWLQENDKSPMTNMALPHKNLIPNYTLLSAILEWKSKER* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02082 807 MobiDBLite consensus disorder prediction 185 213 - -
Rops7g02082 807 Gene3D Transferase(Phosphotransferase) domain 1 526 735 - -
Rops7g02082 807 PANTHER OS02G0152300 PROTEIN 20 801 - -
Rops7g02082 807 Pfam Protein tyrosine and serine/threonine kinase 458 707 IPR001245 GO:0004672|GO:0006468
Rops7g02082 807 ProSiteProfiles Protein kinase domain profile. 453 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02082 807 SMART serkin_6 453 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02082 807 Gene3D Phosphorylase Kinase; domain 1 421 525 - -
Rops7g02082 807 Gene3D HUPs 10 151 IPR014729 -
Rops7g02082 807 SUPERFAMILY Protein kinase-like (PK-like) 434 708 IPR011009 -
Rops7g02082 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672|GO:0006468
Rops7g02082 807 SMART Ubox_2 740 802 IPR003613 GO:0004842|GO:0016567
Rops7g02082 807 Coils Coil 372 406 - -
Rops7g02082 807 ProSitePatterns Protein kinases ATP-binding region signature. 459 480 IPR017441 GO:0005524
Rops7g02082 807 Pfam U-box domain 738 806 IPR003613 GO:0004842|GO:0016567
Rops7g02082 807 ProSiteProfiles U-box domain profile. 736 807 IPR003613 GO:0004842|GO:0016567
Rops7g02082 807 CDD RING-Ubox_WDSUB1-like 738 792 - -
Rops7g02082 807 SUPERFAMILY RING/U-box 735 805 - -
Rops7g02082 807 Coils Coil 319 346 - -
Rops7g02082 807 MobiDBLite consensus disorder prediction 188 213 - -
Rops7g02082 807 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 736 807 IPR013083 -
Rops7g02082 807 Coils Coil 408 430 - -
Rops7g02082 807 CDD STK_N 20 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02082 Rops-Chr7 34768969 34776048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02082 18 804 U-box Gene Family AT4G25160 52.253 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Rops7g02082 PK_Tyr_Ser-Thr 1.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02082 - - gsj:114409387 1282.7