Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02081 ATGCATTCTCAATTGAAGAGTCGCCATCCTCAGTCGTTCCCAATTCATGTTGAGGTGAAGAACAATTCCAAAAAGGATCGAGGGTTTGTGCCTTGGCACATAATTTCTGCTTATGGAGATGAAATAGGACGATCTCCATCTATTCGGACTTCTGGAAACAGAATCTTTGACGTGTGTTTCCTACGATCCTTAACCTGTGGACTGTTCTTCACCAAAGGATGGGAGGAGTTTCTATCTTTGTGCAATCTGGATGACAGGGGAACTATTAGTTTGTCTTTCCATGGGAAGTCAGTTTTCTCCTTCGATGAAGATGTCCAGTATAAAGATTTATCTTTGGAGATTAATGAAAGGACGGAGGGTACCAATCACATAGATGTTGAAGATGTGGAAATTTCTAAGCCATTTGGAAGTAACTTGCCCTCATCCATTGTAACTTCTGGAATGAATTTGAAGCTGGAGTCTCTGATATTGGAGTTTGAAAATGGAAAGTCATGGACCTTTGGTTTATACAATCCCACGGATCGGCCATATGAAGCTAGGATAACTACTGGGTGGAGAGCATTCTGTCTTGAGCACAAGTTGAAGGCAAGAGACAAAATAATGATTCAAGTTATTGACATTTGTCAAAACCATTTCACAGCTCACATCATGCGATCTTAA 660 0.4061 MHSQLKSRHPQSFPIHVEVKNNSKKDRGFVPWHIISAYGDEIGRSPSIRTSGNRIFDVCFLRSLTCGLFFTKGWEEFLSLCNLDDRGTISLSFHGKSVFSFDEDVQYKDLSLEINERTEGTNHIDVEDVEISKPFGSNLPSSIVTSGMNLKLESLILEFENGKSWTFGLYNPTDRPYEARITTGWRAFCLEHKLKARDKIMIQVIDICQNHFTAHIMRS* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02081 219 ProSiteProfiles B3 DNA-binding domain profile. 139 219 IPR003340 GO:0003677
Rops7g02081 219 Pfam B3 DNA binding domain 140 218 IPR003340 GO:0003677
Rops7g02081 219 Gene3D - 120 219 IPR015300 -
Rops7g02081 219 SUPERFAMILY DNA-binding pseudobarrel domain 21 100 IPR015300 -
Rops7g02081 219 SUPERFAMILY DNA-binding pseudobarrel domain 138 217 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02081 Rops-Chr7 34734782 34736354 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Rops7g02081 B3 8.8e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02081 - - fve:101315121 44.2838