Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02066 ATGCATGGGAAGCTGGTGGACATATCTAAAATTGGCAGATCAAGAAGACTTTCTGCAAATGTTGTGATGACCGGCAACATTCTAATCAATGGGAAGAATAGAAGCTTGTATTGCAGAGAAGTGTCTTACATTGCTCAAGAGGAACTCTTTTTGGGAACTTTGACTGTAAAAGAAACCCTCACCTACTCCGCAAACATGAGGCTTCTATCTAAATTGACCAAAGAAGAGATAAATAAAGTGGCTGAAGAAACAATAATGAAAATGGGTCTTGAAGAATGTGCAAATAATAAGATTGGAAATTGGCATTTACGGGGAATAAGTAACGGTGAAAAGAAGAGACTTAGCATTGGCTTAGAGATTTTGACACAACCTCATGTCTTACTTCTTGATGAACCTACTAGTGGACTTGATAGTGCCTCAGCTTTCTATCGGGGAAATGATTTATTTCAGAGAAGCAAAGATGGCTCTAAAGGGTTCCCCTGTCCTATTCGAAGAAATCCTTCAGATCATTTTCTTTTGTGTAGTAATTTGGACTTTGACTTGATTACTGCAACACTAGCAAGAACGCAATTAAGTCTGTCAACACCATCAAATCCAGCAGTAGGAATGAGAACAACACAAATTCGAGGGACACTCGTTGAGAGTTACAAAAGCTCAGAGCTAATGACCAATACAAGAAGAAGGATTCAACAACTGAAACCCAATGATACACAACCTAAGTTTCAGAAGGCAGATTGA 738 0.3875 MHGKLVDISKIGRSRRLSANVVMTGNILINGKNRSLYCREVSYIAQEELFLGTLTVKETLTYSANMRLLSKLTKEEINKVAEETIMKMGLEECANNKIGNWHLRGISNGEKKRLSIGLEILTQPHVLLLDEPTSGLDSASAFYRGNDLFQRSKDGSKGFPCPIRRNPSDHFLLCSNLDFDLITATLARTQLSLSTPSNPAVGMRTTQIRGTLVESYKSSELMTNTRRRIQQLKPNDTQPKFQKAD* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02066 245 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 156 237 - -
Rops7g02066 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 151 IPR027417 -
Rops7g02066 245 Gene3D - 13 155 IPR027417 -
Rops7g02066 245 Pfam ABC transporter 27 134 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02066 Rops-Chr7 34559998 34562263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02066 24 140 Calmodulin-binding Proteins AT2G36910 29.134 3.47e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02066 K05681 - gmx:100802207 304.293