Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02057 ATGGCAATCCTGGGAAAGACATTCCTCGCATTCTTTTCGCTATCTTCAGTTTTCTCAATAGCCTCATCAAGAAGAGGCCCTTCCTCCAGTAACATAGATTGGTGGTGTAACCTAACCCCACAGCCTGACCCATGCAAATACTACACAACTCAAATGAACCACCATTTCACAATCAAACATAAAACTGAATTCAGGGGAATGCTTGTTCAACTGGCCTTAAAACAAGCGCTTATCATGCAAAAGGAAGCAAATGACTATCGACAAAAGATGGTGATGGAGAAGCATAGAACAATACACGGTGATTGTTTGAAGCTGTATGAAAACACCATCTTTCATCTTAATCGTACCCTTGAAGGTCTTAATGTGAAGAGGGGTTGTTCTCCAGTTGATGCACAAACTTGGCTCACCACTGCTCTCACAAACATTCAAACCTGTAGAACCGGGGCTGTTGAACTCAATGCTCAAAAAGATTTCATGGTGCCAACTTGGAGCAACAATGTCACTGAGATGATAAGGAACAGCTTAGCCATCAATATGGATTTCCTGAAACAAAAGGCAGCTAATCACACAGCAGAAGCAGAAGAGGAATTTCCCAGTTGGTTTTCAAGGCACGAGAGGAAACTGTTGCAGTCTTCTTCCATAAAAGCACATCTTGTGGTAGCAAAAGATGGTTTAGGACACTTCAAGACCGTCCAAGATGCCCTGAATGCAGCTGCAAAGAGAAAATACAAAACGAGGTTTGTGATACATGTGAAGAAAGGGGTGTATAGAGAGAATATAGAGGTTGCAGTGAAAAATGATAACATAATGCTGGTTGGTGATGGGATGCAAAATACCATAATAACGAGTAGTAGAAGTGTTCAAGATGGTTTTACAACCTATAGCTCTGCAACTGCAGTGTTTCAACGGACATATTTAGAAAATCACTCTTTCTTTCTCGAAATTGAAAGGTCCGTTTTGTGGGTCTGGCTACGGTGGACTACCAAAAAAGTGATCTACCATGGACCTCTTAAAACAGTATCCATTTTTAATATTGAAATCTCTCTTTTACCCTTCTACTTTCTCTTCCTTCTTCTCCTCACCAACGGTGGCAAGAATGTGCCATCAATCCTCAGTGGCCCTCAACTAACTACCTCTTCTAACAACAGTGGGAGTAAATCCCAATTGCCACAGCAGCAAATATCAAAGCAACAAATTTTACCACAAGCACAATTGTTCTTCTCAAATCCTTACGTGCACTCCCAAGTTTCACAACCCAATAGTTCCACCACCACCACCACCACTACTGCTGCAAGTGGGTATTATCTTCAACGGCGTGACCCTGAGCAAGTGCAACGACAAGGTGGCAATTGGGATTTGGGAGTGACTGGTTTCACAACCCAATAG 1386 0.4221 MAILGKTFLAFFSLSSVFSIASSRRGPSSSNIDWWCNLTPQPDPCKYYTTQMNHHFTIKHKTEFRGMLVQLALKQALIMQKEANDYRQKMVMEKHRTIHGDCLKLYENTIFHLNRTLEGLNVKRGCSPVDAQTWLTTALTNIQTCRTGAVELNAQKDFMVPTWSNNVTEMIRNSLAINMDFLKQKAANHTAEAEEEFPSWFSRHERKLLQSSSIKAHLVVAKDGLGHFKTVQDALNAAAKRKYKTRFVIHVKKGVYRENIEVAVKNDNIMLVGDGMQNTIITSSRSVQDGFTTYSSATAVFQRTYLENHSFFLEIERSVLWVWLRWTTKKVIYHGPLKTVSIFNIEISLLPFYFLFLLLLTNGGKNVPSILSGPQLTTSSNNSGSKSQLPQQQISKQQILPQAQLFFSNPYVHSQVSQPNSSTTTTTTTAASGYYLQRRDPEQVQRQGGNWDLGVTGFTTQ* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02057 461 Gene3D - 210 314 IPR012334 -
Rops7g02057 461 SMART PMEI_2 27 177 IPR006501 GO:0004857
Rops7g02057 461 MobiDBLite consensus disorder prediction 438 461 - -
Rops7g02057 461 NCBIfam pectinesterase inhibitor domain 7 178 IPR006501 GO:0004857
Rops7g02057 461 CDD PMEI-like_3 34 178 - -
Rops7g02057 461 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 181 IPR035513 -
Rops7g02057 461 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 178 IPR035513 -
Rops7g02057 461 Pfam Pectinesterase 218 301 IPR000070 GO:0030599|GO:0042545
Rops7g02057 461 PANTHER PECTINESTERASE 19 300 - -
Rops7g02057 461 Pfam Plant invertase/pectin methylesterase inhibitor 31 177 IPR006501 GO:0004857
Rops7g02057 461 SUPERFAMILY Pectin lyase-like 213 303 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02057 Rops-Chr7 34298051 34300464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02057 26 311 Carbohydrate Esterase AT3G47400 47.667 4.17e-84 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02057 K01051 - gmx:100806133 404.06