Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02050 ATGCACGATGCCGATTCAGCTTCTTCTATGGCACAGACAAAGAGTCACCATCGATATTTCTTCAACCGTTCCCATTTTCGAGTTGGGGGAAACCTCAAATATCACAACGATTTTGATTCTGAAGGAGGATCGGGGAGTTATGATGATAAAGCAAATGTCGAAGGAAACAAATCAACTCCAAAAGGAGGTTTCCAGTTGAAACTCGAGGCTAAGGTTCCCAGTCCATCACCCCATTCCATTTCATCGAGTATGGCATATCAGTTCACTCTTACTGAGTATAGTTCATCAAATAACCATCAGAATCTTCCTGGAGCCTTTGTAAATTCATCATTGAACCTGAGATTGAAAAATGTGTCTTTGGAGATTCATGACGACAGGAAGTGGAAATGTAGGCTATATTATCACAGTTCCATACCGAAGGAGGCTATATTGAGCATTGGGTGGAAGGTCTTTTGTGGTGACTTGGATTTGAAAGAAGGAGATGTCATCCAATTCCAAGTTATTCATAGGAAGAAAAATCAAGTTCTTGCACATATTCAACATTGA 546 0.4029 MHDADSASSMAQTKSHHRYFFNRSHFRVGGNLKYHNDFDSEGGSGSYDDKANVEGNKSTPKGGFQLKLEAKVPSPSPHSISSSMAYQFTLTEYSSSNNHQNLPGAFVNSSLNLRLKNVSLEIHDDRKWKCRLYYHSSIPKEAILSIGWKVFCGDLDLKEGDVIQFQVIHRKKNQVLAHIQH* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02050 181 MobiDBLite consensus disorder prediction 43 64 - -
Rops7g02050 181 Gene3D - 76 181 IPR015300 -
Rops7g02050 181 CDD B3_DNA 89 165 IPR003340 GO:0003677
Rops7g02050 181 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 29 175 IPR039218 -
Rops7g02050 181 Pfam B3 DNA binding domain 90 175 IPR003340 GO:0003677
Rops7g02050 181 SUPERFAMILY DNA-binding pseudobarrel domain 85 176 IPR015300 -
Rops7g02050 181 ProSiteProfiles B3 DNA-binding domain profile. 85 181 IPR003340 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Rops7g02050 B3 2.2e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02050 - K13456 psom:113321368 59.6918