Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02035 ATGGCTGGGATTGATGATAATATTTCCCTTACTGGTGGTGATTGGGGTCTTCCTAGTCCAAGTCCAAGGACCCTTTTTTCTAGATTGCTAGATGAAGATAATGTAACAAGATCAATCTCAGAACATTCTGGAAGTGGTAGAACAACTGGGGATCTCTTTGCAGGAACTCATCATGAGACAGGGAAAGGAAACATGAAAGATGGTGGTGATTCTAGTGCCCAATTGAGTGACATGAGTTTCGGGACCGAGATGAAATCGAGTTCGCGGGGTGGTCTTGTTGAAAGAATGGCTGCTAGAGCTGGTTTTAATGCTCCAAGGTTGAATACAGAAGGAATTAGATCTACTGACCTTTCACTTAATTCTGACATTCAGTCTCCTTACTTGACCATACCACCTGGTCTCAGTCCTACTACACTTTTAGATTCTCCAGTGTTCCTTGCAAATTCACTGGCACAACCATCTCCAACAACTGGAAAGTTTCCATTCATCTCAAATGGCAACTTTCGGGCCTCAGAATTATCATCTGATGCTCTAGAAAAATGTAAAGATAATGGATTTGATGATATCTATGCATCGTCCTTTGCTTTCAAGCCTGCAATAGATTCGGGCTCCTCGTTTTATCATGGTGCTGGAAGAAAAACAGATCCAACTACACTTCCTCAACAATCTCAAAGTGTTGATGCAGTCAAAGTTCAAACTGAAAATAGAAGTAGCCTGCATCTTCAGACAGACTACATAGAATCAACACCTCAAAAAGATAATGGAAGTAAAATGTTCTCAACTGATCAAAGGGCTTTTGATGCTGTTGGTGGTAGCATGGAACATTCTACTCCACTTGAAGTGCAAGCAGATGAAGAGGGAGATCAAAGAAGCAACGGAGACTCAATGGCTGGTGGTGTTGGTGGTGCACCATCTGAAGATGGATATAACTGGAGAAAATATGGCCAAAAACAAGTTAAGGGTAGTGAGTACCCACGAAGTTACTACAAGTGTACACATCCAAATTGTCAGGTTAAGAAGAAAGTAGAACGTTCTCATGAGGGCCACATAACAGAGATCATCTATAAGGGAGCGCACAACCATCCAAAACCTCCTCCTAGTCGCCGGTCGGGCATAGGGTCAGTTAACCCTCATACTGACATGCAAGTGGACAATCCTGAACATATTGAACCACAGAATGGTGGTGATGGTGACCTGGGCTGGGCTAATGGACAAAAGGGAAATATAAATGGAGCTGCTAATTGGAAACATGACAACCTTGAAACGACATCATCGGCATCTGCTGGCCCTGAGTACTGCAACCAGCCCACCAATATGCAGGCTCAAAATGGTACTCACTTTGATTCGGGAGATGCAGTGGATGCCTCATCTACTTTTTCCAATGAAGAAGATGAAGATGATCAAGGCACTCATGGTAGTGTATCATTGGGTTATGATGGGGAAGGAGATGAATCAGAGTCTAAAAGAAGGAAACTGGAATCATATGCAACAGAGTTGAGTGGAGCTACTAGAGCTATTCGTGAGCCTAGAGTTGTTGTACAGACTACCAGTGAAGTAGATATCCTTGATGATGGTTACCGGTGGCGCAAATATGGGCAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACCAATGCAGGTTGCACAGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTTAAATCAGTGATCACTACATATGAGGGAAAGCACAACCATGATGTTCCTGCAGCTCGTGCTAGCAGTCACGTCAACGCGAATGCTTCTAACACTCTTCCTGGGCAAGCTTCTGGTGTTCTTCCATCCCATGTTCATAGGCCAGAACCATCTCAAATCCACAATGGCATTGGAAGGCTTGAAAGGCCTTCACTTGGCTCATTCAACCTTCCTGGGAGGCAACAACTAGGACCTTCTCATGGCTTCTCCTTTGGCATGAACCAATCTATCCTCTCAAACTTGGCCATGTCAGGATTGGGCCCCGCGCAAGCAAAGCTTCCTGTCATGCCTGTTCATCATCCATTCTTGGCACAACAAAAACAACAACAACAACATCAACATCAACGCCCTGCAAATGAAATGGGGTTCATGTTACCAAAGGGAGAACCAAATGTGGAGCCTCCTACTATTCCTGAACAACGTGGTAACCTTAACATGCCTAGTGGTTCATCAGTATATCAAGAAATCATGAGTCGTATGCCTCTTGGACCTCATATGTAA 2235 0.4403 MAGIDDNISLTGGDWGLPSPSPRTLFSRLLDEDNVTRSISEHSGSGRTTGDLFAGTHHETGKGNMKDGGDSSAQLSDMSFGTEMKSSSRGGLVERMAARAGFNAPRLNTEGIRSTDLSLNSDIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFPFISNGNFRASELSSDALEKCKDNGFDDIYASSFAFKPAIDSGSSFYHGAGRKTDPTTLPQQSQSVDAVKVQTENRSSLHLQTDYIESTPQKDNGSKMFSTDQRAFDAVGGSMEHSTPLEVQADEEGDQRSNGDSMAGGVGGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGAHNHPKPPPSRRSGIGSVNPHTDMQVDNPEHIEPQNGGDGDLGWANGQKGNINGAANWKHDNLETTSSASAGPEYCNQPTNMQAQNGTHFDSGDAVDASSTFSNEEDEDDQGTHGSVSLGYDGEGDESESKRRKLESYATELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNANASNTLPGQASGVLPSHVHRPEPSQIHNGIGRLERPSLGSFNLPGRQQLGPSHGFSFGMNQSILSNLAMSGLGPAQAKLPVMPVHHPFLAQQKQQQQHQHQRPANEMGFMLPKGEPNVEPPTIPEQRGNLNMPSGSSVYQEIMSRMPLGPHM* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02035 744 SMART WRKY_cls 305 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g02035 744 SMART WRKY_cls 522 581 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g02035 744 ProSiteProfiles WRKY domain profile. 517 582 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g02035 744 SUPERFAMILY WRKY DNA-binding domain 304 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops7g02035 744 MobiDBLite consensus disorder prediction 407 457 - -
Rops7g02035 744 SUPERFAMILY WRKY DNA-binding domain 514 582 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops7g02035 744 MobiDBLite consensus disorder prediction 281 312 - -
Rops7g02035 744 MobiDBLite consensus disorder prediction 354 497 - -
Rops7g02035 744 FunFam WRKY transcription factor 295 365 - -
Rops7g02035 744 MobiDBLite consensus disorder prediction 232 258 - -
Rops7g02035 744 MobiDBLite consensus disorder prediction 37 74 - -
Rops7g02035 744 MobiDBLite consensus disorder prediction 685 727 - -
Rops7g02035 744 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 140 599 IPR044810 GO:0003700
Rops7g02035 744 Gene3D WRKY domain 300 365 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops7g02035 744 MobiDBLite consensus disorder prediction 481 495 - -
Rops7g02035 744 ProSiteProfiles WRKY domain profile. 306 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g02035 744 Gene3D WRKY domain 509 575 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops7g02035 744 FunFam WRKY transcription factor 33 509 575 - -
Rops7g02035 744 Pfam WRKY DNA -binding domain 523 579 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g02035 744 Pfam WRKY DNA -binding domain 306 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g02035 744 MobiDBLite consensus disorder prediction 593 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02035 Rops-Chr7 33928577 33933983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02035 1 739 WRKY Transcription Factor Family AT5G56270 51.242 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops7g02035 WRKY 3.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02035 K18835 - gmx:100796545 1241.1