Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02030 ATGCCGGAAAACGATCACCATCGTCTTCTGGGTTCTTCTGAAGATGAAGGAGATCGTGGTGATGTGGAAGCTCAAGGGTCACAAGGTTTAGCCATCAATGGCAATGGCAATGGCAATAGCAGCAACAAAGGTTTCAGGGATTTGTTAAGGTTGTCGGGTCATCACCGACACAGTTTCAAGCGTGTTGATAAAGATGGAGGAGATAGAAGAGATCGTGGTGAACACAATAATAATCATCATCGTGATTCACCCTCTGATTTTGATCTTGATTCTTCTGGTGATGTACTTGGTGATAGTGCACCTCCTGAATGGGCTTTGCTTCTCATTGGTTGCCTCCTTGGCCTTGCCACTGGTCTCTTTGTAGCTGTTTTCAATAAAGGGGTGCATGTAATACATGAATGGACGTGGGCTGGTACTCCAAATGAGGGTGCTGCTTGGCTTCGTTTGCAGAGATTGGCTGATACGTGGCATCGAATCCTTTTGATACCTGTCACTGGAGGAGTCATTGTTGGCATGATGTGTGGTTTACTGGAAATACTGGAGCAAATAAAGCAATCCAGTTATTCCTCTCAAAGACAAGGTTTTGATTTGCTTGCAGGAATCTTTCCAACAATAAAGGCTATTCAGGCTGCAGTCACTTTAGGTACTGGCTGTTCATTGGGTCCTGAAGGTCCCAGTGTTGATATTGGAAAGTCATGTGCCAATGGATTCTCACTAATGATGGAAAACAACAGAGAAAGAAGAATAGCACTTGTTGCAGCTGGCGCAGCAGCTGGAATTTCTTCAGGCTTCAATGCAGCAGTTGCTGGTTGTTTCTTTGCTATTGAAACTGTGCTGAGGCCTCTTCGTGCTGAGAATTCTCCTCCATTTACAACTGCCATGATTATATTGGCTTCTGTTATCTCATCCACTGTATCAAATGTTTTACAGGGAACCCAATCAGCTTTTACAGTGCCTGAGTATCAGTTGAAATCTGCTGCTGAGCTACCTTTATATCTGATATTGGGAATGCTATGTGGTTGTGTAAGTGTGGCCATGACTCGCTTGGTTGCTTGGTTCACCAAATTCTTTGAGGTTATCCAGGAGAAATTTGGCCTTCCTACCGTAATCTGCCCTGCTATAGGTGGTTTAGGAGCTGGGATCATTGCTCTTAAATATCCTGGAATATTGTATTGGGGTTTCACAAATGTGGAAGAAATTCTACGAACCGGAAAGAGTGCTTCAGCTCCTGGAATATGGCTTCTTGCTCAATTGGCAGGTGCTAAGGTTATTGCCACAGCTCTTTGCAAGGGATCTGGGCTAGTAGGTGGTCTTTATGCACCAAGTTTAATGATTGGTGCTGCAGTTGGTGCTGTATTTGGAGGCTCTGCTGCAGAAGTTATCAATTCAGCAATTCCTGGAAATGCTGCTATTGCCCAACCCCAGGCATATGCTCTGGTAGGGATGGCTGCGACATTAGCATCTGTTTGTTCTGTTCCTTTGACTTCAGTTCTACTTCTGTTTGAGCTGACAAAAGATTATAGGATACTGCTTCCTCTCATGGGGGCTGTTGGATTGGCAATATGGGTTCCCTCAGTGGCAAACCAGCCGAAGGAGAGTGATACACCTGATACAAGAAGCCCAGCAAAAGGATATTCTTCAATTTCAGATGCTGAAGATAATGATGAGGGTAACTGGAGACAAGCCAATGATGGGAATGGTTTAGAACTCTGTATTGTTGGAGATGCAGCTAATCTTGAAGAAATTGATGAGGAACTGCTTCTGGACAATCTCAAGGTTTCTCAGGCCATGTCAAAACATTATCTTAAGGTTTCATCATCTGTAACCCTGAAAGATGCAATCAAAAGCATGCATGACAGCCAGCAAAATTGTGTGCTGGTGGTTGATGAAGAAGATTTTCTAGAAGGAATATTGACACATGGTGATATTAGAAGATGCCAGTCTGAGAAGTCTAATGATACTTCTAACAGTGATTCAGGTCTTCTAGATGTGAACACATGCCTTGTTTCCTCTGTCTGCACTCGAGGGATGAGATATCGTGGACGAGCACGTGGACTTTTAACCTGTTATCCAAATACTAGTTTGGCTATGGCCAAAGAGTTAATGGAGGCCAAGGGCATTAAACAATTGCCAGTAGTTAAACGTGGTGGAGATCAAAGTAGAGAGAGGAAGCGAAGAATTATTGGTCTTCTTCTTTATGACGCATTGGGGCTGTGTCTCAGGAAAGAGATTAACCACCGGAAGTCAGCTTATCAAAATAGGACAGAAAACAATTTGGCTGTGATTAATGCAAATGGGAATTAA 2304 0.4349 MPENDHHRLLGSSEDEGDRGDVEAQGSQGLAINGNGNGNSSNKGFRDLLRLSGHHRHSFKRVDKDGGDRRDRGEHNNNHHRDSPSDFDLDSSGDVLGDSAPPEWALLLIGCLLGLATGLFVAVFNKGVHVIHEWTWAGTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMCGLLEILEQIKQSSYSSQRQGFDLLAGIFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENNRERRIALVAAGAAAGISSGFNAAVAGCFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSNVLQGTQSAFTVPEYQLKSAAELPLYLILGMLCGCVSVAMTRLVAWFTKFFEVIQEKFGLPTVICPAIGGLGAGIIALKYPGILYWGFTNVEEILRTGKSASAPGIWLLAQLAGAKVIATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAAEVINSAIPGNAAIAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVANQPKESDTPDTRSPAKGYSSISDAEDNDEGNWRQANDGNGLELCIVGDAANLEEIDEELLLDNLKVSQAMSKHYLKVSSSVTLKDAIKSMHDSQQNCVLVVDEEDFLEGILTHGDIRRCQSEKSNDTSNSDSGLLDVNTCLVSSVCTRGMRYRGRARGLLTCYPNTSLAMAKELMEAKGIKQLPVVKRGGDQSRERKRRIIGLLLYDALGLCLRKEINHRKSAYQNRTENNLAVINANGN* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02030 767 CDD Voltage_gated_ClC 116 520 - -
Rops7g02030 767 MobiDBLite consensus disorder prediction 28 46 - -
Rops7g02030 767 MobiDBLite consensus disorder prediction 528 547 - -
Rops7g02030 767 ProSiteProfiles CBS domain profile. 597 654 IPR000644 -
Rops7g02030 767 MobiDBLite consensus disorder prediction 1 22 - -
Rops7g02030 767 Pfam CBS domain 685 731 IPR000644 -
Rops7g02030 767 Pfam CBS domain 593 646 IPR000644 -
Rops7g02030 767 SUPERFAMILY CBS-domain pair 588 717 IPR046342 -
Rops7g02030 767 PRINTS Chloride channel signature 257 276 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops7g02030 767 PRINTS Chloride channel signature 475 491 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops7g02030 767 PRINTS Chloride channel signature 493 512 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops7g02030 767 PRINTS Chloride channel signature 434 454 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops7g02030 767 PRINTS Chloride channel signature 206 225 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops7g02030 767 MobiDBLite consensus disorder prediction 1 46 - -
Rops7g02030 767 MobiDBLite consensus disorder prediction 58 94 - -
Rops7g02030 767 MobiDBLite consensus disorder prediction 528 562 - -
Rops7g02030 767 SUPERFAMILY Clc chloride channel 102 527 IPR014743 -
Rops7g02030 767 FunFam Chloride channel protein 94 539 - -
Rops7g02030 767 Pfam Voltage gated chloride channel 198 523 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops7g02030 767 SMART cbs_1 600 648 IPR000644 -
Rops7g02030 767 SMART cbs_1 685 741 IPR000644 -
Rops7g02030 767 PANTHER CHLORIDE CHANNEL PROTEIN CLC-E 28 752 - -
Rops7g02030 767 CDD CBS_pair_voltage-gated_CLC_euk_bac 597 737 - -
Rops7g02030 767 FunFam Chloride channel protein 578 737 - -
Rops7g02030 767 MobiDBLite consensus disorder prediction 58 88 - -
Rops7g02030 767 Gene3D Clc chloride channel 95 535 - -
Rops7g02030 767 Gene3D - 576 736 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02030 Rops-Chr7 33866386 33876836 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02030 K03281 - gmx:100787625 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g02030 7 33866386 33876836 Rops7g02030 7 33866386 33876836 ECH