Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02027 ATGGAAAGTGAAAGAGAGGACAACCAAGGGATCAATTCAAGTTCAACCCACAATGCAATCTCTAGCACACTTACAATCAAGATTGGAAGCAGCAGTAAACAAGGTGGAGAGAGTTTAGACAATTCAAACTTACCTTCACCAAACATAAAGAACTCCATAGAATCAACACCTTATGGCTCTCCTCTTGTGTCTCCACCTTCATCAGCATTTGTTTCAGCATTGCAATCTCCATATATATCTCCAAGGGCCACAATCCCAAAGCCTCCAGAAGGGTCTCCCTTAGAGAATCCACCACCACCACCAACAACAACAATAACAACAATCACCACTACCCATCCTTCCACTCCAGAAGACTTGCCTAGTAGTTCCTACACTCCCCCTTCTGATCCATATGAGTTTTCTGATGACACTGCTGATACAAAGCTCAAATATGTGACATGTGTTCCAGTGCCTGAAGCAGCTCCTCCAAGAATCTCATTCTCATTTCCAGTCCCTAGAGTTTCCTTTGCAAAAGGCCCTGTCTCCCCTGCTACCAATGCCAAACTCAGAAGCTGTGATGTCTACATTGGATTCCATGGCCAAAATCCCAACCTGGTACGCTTCTGCAAGTGGCTTAAGTCTGAGCTTGAACTTAAAGGGTTTGATTGCTTGCTTGCTGATAGAGCAAAGTATTCAGATAGTCAAAGCCATGAAATTGCTGATAGAGTCATTTGCTCAGTGGCATTTGGATTGGTGGTTGTCACAAGTTCCAGTTTCCTCAACCATCTAAGCCTGGAGGAGGTGAGATTCTTTGCTCAAAAAAAGAACTTGATTCCTATCTTATTTGACACAGGACCTGCTGAGATTATGGCTCTTCTTAACTGCAACTCAATTGACAAAGAATGTAAAGAGGCAATTGATGGACTCATGAAGTGCAATGAGTTCAATCTAGAGGCTAATGAAGGTAATTGGAGAAGCTGCATATCAAAAGTTGCTGGTATCTTAAGAGCAAGACTTGGTAGGAAGAATGCTGAGCAGAAGGATAGTATGCAAGGATTTGAGAATTTACCCTTCCCAAGGAACACATACTTTGTTGGAAGAGAGAAGGAGATTATGGAGATTGAAGGTCTATTTTTCGGACGTGGGAATTGTATGGAACAAGTCCAAGATCATTGTAGGACAGTCATCAAAGGAGAAGCCAGTGGAAGTGGACAATCTGAAGGTCTTGCAGATGAGGAGAGTGAACCAGTGATCAGCAAAGGTGGGAGGTACATTAGTCTAGAGATGGGGAGGAACAAAGAACCAAATTTAGAGACTTGGGTTGAACCAATCATAGGAAACAATTCAATGAAGAGGTTCAAGAATAAGAAGTCAAAGAGTGGAAACTTTAAGAACTTGTGTAGTAGTGTGATTTGCATTAATGGGGTTTCTGGGATTGGGAAGTCTGAGCTGGCTTTAGAATTTGCTCACAGATATTACCAGAGATACAAAATGGTCTTGTGGGTTGGTGGTGAAGCTAGGTATCTTAGGCAGAACATATTGAACTTGTCTCTCAATTTAGGTTTGGATGTTGGTGCTGATTCTGAGATGGAAAGGGGTAGATTTCGTGGCTTTGATGAGCAAGAATTTGAAGCATTCAAGAGAATCAAGAGGGAACTGTTTGGTGAGACACCTTACTTGCTGATAATTGATAATCTTGAGACTGAAGAGGAATGGTGGGAAGGAAAGGATCTATATGACTTGATACCAAGAAACACAGGAGGGACTCATGTGATCATTACTACTAGGTTGTCCAAAATAATGAACTATGATACTATTCAGCTTCCACCATTGTCATTATCTGATGCAATGATTGTGATAAGAGGAAGAAAAAGGAAAGAGTATCCAGCTGATGAGATAGATTTCCTGGAAAAAATCTATGAGAAACTTGGAAGGTTGAGCTTTGGTTTGTGGATAATTGGTTCTCTGTTGTCTGAACTTGCAATTGGCCCATGTGCTCTCTTTGAGGCCATAAACCAGGTGCCACTCAATGAAGATTCTTCAAGTTCTTGTTATATGAGCATTGAAGAAGAACAATGGTGCAAGAGCAATCCTTTCCTCATGAAGACCCTCCTCTTTTGTTTAGGAACTCTGGAGAAATCTAAAGCAAAAGGGAACCTCCTGGCCATAAGAATGCTTCTAGTTGGTGGATGGTTTTCCCCTGCTCTCATTTCAGCCAGTTTATTAGCCAATGCAGCGAAGAGTATCCCTAGTGTTGAAAACAGTCTAAAAAAGTGGACCAAATGTCTGAGCCTAACAACTAGTTGTTTATCATCAAGGACATGGAAAAATGATGAAGATTCAACAATACTTCTAGTGAAAATGGGACTGGCTAGAAGGGCCAATCAACATGATGGATGTTGTTGGCTCAAGTTCCATCCCATCACACAGTCATTTGCTAAAAGAAAAGGTGGTTTGCAATATGCCAAGGCTGCAATTCAAGGAATAAGAAAAATGGGCAACCATGTAATCATAGATCATTTGTGGGCATCAGCTTTCCTTGTGTTTGGTTTCAAATCTGAGCCCCCACTTGTGCAGCTAAAAACAATTGACATCGTTTTGTACATCAAAAGAACAGCTCTCCCCCTTGCAATCCAAGCCTTCACCACATTCTCAAGATGCAATTCAGCTTTGGAGCTCTTAAAGGTGTGCACCAATGCACTGGAAGAAGTTGAGAAGTCCTTTGTGTCTCAAATCCAAGATTGGTCCCATGACTCAATTTGTTGGAAAAGAAGGCTACAAAGAAGCCAAAAAGTGGATGAATATGTGTGGCAGGATGTCACCTTATTGAAGGCAACCCTATTGGAGACTAGAGCTAAGTTGCTAGCAAGAGGGGGGCTTCTAGACAGTGGCAAGGAACTGTGCAGAACATGTATTAGTATCAGAACTGTGATGCTTGGCCATAACCATGCTCAGACCTTGGCTGCTCAAGAGACATTGGCAAGATTGGTGAGAATGAGGAGTAAGATATAA 2991 0.4183 MESEREDNQGINSSSTHNAISSTLTIKIGSSSKQGGESLDNSNLPSPNIKNSIESTPYGSPLVSPPSSAFVSALQSPYISPRATIPKPPEGSPLENPPPPPTTTITTITTTHPSTPEDLPSSSYTPPSDPYEFSDDTADTKLKYVTCVPVPEAAPPRISFSFPVPRVSFAKGPVSPATNAKLRSCDVYIGFHGQNPNLVRFCKWLKSELELKGFDCLLADRAKYSDSQSHEIADRVICSVAFGLVVVTSSSFLNHLSLEEVRFFAQKKNLIPILFDTGPAEIMALLNCNSIDKECKEAIDGLMKCNEFNLEANEGNWRSCISKVAGILRARLGRKNAEQKDSMQGFENLPFPRNTYFVGREKEIMEIEGLFFGRGNCMEQVQDHCRTVIKGEASGSGQSEGLADEESEPVISKGGRYISLEMGRNKEPNLETWVEPIIGNNSMKRFKNKKSKSGNFKNLCSSVICINGVSGIGKSELALEFAHRYYQRYKMVLWVGGEARYLRQNILNLSLNLGLDVGADSEMERGRFRGFDEQEFEAFKRIKRELFGETPYLLIIDNLETEEEWWEGKDLYDLIPRNTGGTHVIITTRLSKIMNYDTIQLPPLSLSDAMIVIRGRKRKEYPADEIDFLEKIYEKLGRLSFGLWIIGSLLSELAIGPCALFEAINQVPLNEDSSSSCYMSIEEEQWCKSNPFLMKTLLFCLGTLEKSKAKGNLLAIRMLLVGGWFSPALISASLLANAAKSIPSVENSLKKWTKCLSLTTSCLSSRTWKNDEDSTILLVKMGLARRANQHDGCCWLKFHPITQSFAKRKGGLQYAKAAIQGIRKMGNHVIIDHLWASAFLVFGFKSEPPLVQLKTIDIVLYIKRTALPLAIQAFTTFSRCNSALELLKVCTNALEEVEKSFVSQIQDWSHDSICWKRRLQRSQKVDEYVWQDVTLLKATLLETRAKLLARGGLLDSGKELCRTCISIRTVMLGHNHAQTLAAQETLARLVRMRSKI* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02027 996 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 166 304 - -
Rops7g02027 996 Gene3D - 440 599 IPR027417 -
Rops7g02027 996 PANTHER DNA REPAIR PROTEIN RADA 52 991 - -
Rops7g02027 996 MobiDBLite consensus disorder prediction 105 130 - -
Rops7g02027 996 MobiDBLite consensus disorder prediction 8 79 - -
Rops7g02027 996 MobiDBLite consensus disorder prediction 82 104 - -
Rops7g02027 996 Pfam NB-ARC domain 448 596 IPR002182 GO:0043531
Rops7g02027 996 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 653 IPR027417 -
Rops7g02027 996 SMART AAA_5 460 618 IPR003593 GO:0016887
Rops7g02027 996 MobiDBLite consensus disorder prediction 1 130 - -
Rops7g02027 996 SUPERFAMILY Toll/Interleukin receptor TIR domain 184 283 IPR035897 -
Rops7g02027 996 Gene3D - 170 300 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02027 Rops-Chr7 33801661 33804651 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02027 - - gmx:100780810 1630.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g02027 7 33801661 33804651 Rops7g02027 7 33801661 33804651 ECH