Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02008 ATGAATACCTCTACCAGTACATGTGAGATAGTGGAATCAAGGGAAGAGATAATTTCCGAGTTCAAAATGGATGAAAAACCTGAGAGTAGCTGTTCCCACAAATCAGGAAAAAAGTATTCGATTGAGGATGATATTAATCGTCTCTTCCAGGCTATTGAGATCAAGAGTTCATCTAGAGGTCATAGTACATCACGATCACAAAAGAGTGTGTCTAAACGGCCGATAAAAGTCAGTTCATCTCAGGCATCAGGAATTGGCATCTCGGAGCCTGTGAGTTTGAAGCAGGCACTTAGAGGGTTGTGCATCTCTCAGGCATCGGAAATGGCTGCTTTGAAGAGACTATCAAAGCCATGCAGTTCATCAAGAGTATCTGAGGCTGGCACCATCAAAAAGTTATACACTGCAGTAGTAGATGAGGGGAAAGGGAACATGGTGGAAATCTCCCTAGTGCCAGAGATATCTGCACCTTCGGATAAATTGACTGGTTTAGCAATATCAAGTTCAAGTGCTAATCATTCTATTCCTTTGGTTGATGCAACAAACCCGAAAGAAATGACAACCAGGTTTGCATCTCGAGATCAGATTGTTCCTCTTCCACCTGAGGATGAGGGTGATAAGCCAACCATAGGGATTGGAAAACCAATACTTGCAAATTTGTCACCAGTTACTTCAGGAAATGAGGAAGTGCCGGAGGTCAGAATGGATCCTGCTTCCTCGAGTAAAGTTTCTCTCAGTTCTTCAATGCCAGATAATGTGCAGGAAGCAAATTTACATTCTGCATCTTGTCCACCTAGCTCTAGCACTGGTAATGGAGTGGGTAAACCCACAATCAGTAATACATGTTTGGCAAAGCCAAGATTCAATAACATGAACTTCCTTAAGAAAAAAGTAAAGCAAGATCCATGCTCTTCCTCCAGCTGCTCTACTTCATGTACAAGTAATTTGGACAAGGAGACTGGCAATTCTGATTTGAAGCATGAAGGGAAAGAAAATGATAAACTGTCTCCCTGCAGTTCAAATCATAGCATCGAAGTTAACTCGGTTAATGTTAGTACGGAATCAAGCAAAACCGGTTTCAGTTTGAATTGCAATAAGAGAACAAAGTTTCTAGTGACAAAAGTTGATGAGAAATCAAGATCAAAGGAAAAGGGTGAATTCTCCCAAAGCTCAAAAAGTAGTATTGGTGAGTATAGTAGTAGCACAAGCATCAGTGAGGAGAGCAATCTAAGTGGTTCCAGTCGCAGTGGCCATAGACCTCACATGTCAAAACACTTGAGATGGGAAGCTGTTCGTGCTGTTCAACAGCAGCATGGTAATTTACATTTGAAGCACTTCAAGCTGCTAAGGAGGCTTGGTAGTGGGGACATTGGAACTGTTTATCTTGCGGAACTGATTGGTACTAACTGCCTTTTTGCACTGAAAGTGATGGACAATGAATTTTTGGCAAGCCGGAAGAAAACGTTCAGGGCTCAAACTGAAAGAGAGATCCTTCAGATGCTGGATCATCCTTTTCTTCCAACACTTTATTCCCATATCGCAACAGATAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGTGGGGATCTGCATGTGCTGCGACAGAGACAACCATATAGGAGTTTCTCAGAACAAGCAGCTAGTGCTCCATCTATGGCCATACAGAAGGAGAATGCAAATGATTTAGAAGATACAGAAGATTGTGAAGAGTTTGAGCTGTTTTAG 1725 0.4203 MNTSTSTCEIVESREEIISEFKMDEKPESSCSHKSGKKYSIEDDINRLFQAIEIKSSSRGHSTSRSQKSVSKRPIKVSSSQASGIGISEPVSLKQALRGLCISQASEMAALKRLSKPCSSSRVSEAGTIKKLYTAVVDEGKGNMVEISLVPEISAPSDKLTGLAISSSSANHSIPLVDATNPKEMTTRFASRDQIVPLPPEDEGDKPTIGIGKPILANLSPVTSGNEEVPEVRMDPASSSKVSLSSSMPDNVQEANLHSASCPPSSSTGNGVGKPTISNTCLAKPRFNNMNFLKKKVKQDPCSSSSCSTSCTSNLDKETGNSDLKHEGKENDKLSPCSSNHSIEVNSVNVSTESSKTGFSLNCNKRTKFLVTKVDEKSRSKEKGEFSQSSKSSIGEYSSSTSISEESNLSGSSRSGHRPHMSKHLRWEAVRAVQQQHGNLHLKHFKLLRRLGSGDIGTVYLAELIGTNCLFALKVMDNEFLASRKKTFRAQTEREILQMLDHPFLPTLYSHIATDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQAASAPSMAIQKENANDLEDTEDCEEFELF* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02008 574 MobiDBLite consensus disorder prediction 299 318 - -
Rops7g02008 574 MobiDBLite consensus disorder prediction 238 277 - -
Rops7g02008 574 Gene3D Phosphorylase Kinase; domain 1 438 574 - -
Rops7g02008 574 PANTHER FLIPPASE KINASE 1-RELATED 294 547 - -
Rops7g02008 574 ProSiteProfiles Protein kinase domain profile. 445 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02008 574 MobiDBLite consensus disorder prediction 213 277 - -
Rops7g02008 574 MobiDBLite consensus disorder prediction 387 416 - -
Rops7g02008 574 MobiDBLite consensus disorder prediction 380 422 - -
Rops7g02008 574 SUPERFAMILY Protein kinase-like (PK-like) 418 545 IPR011009 -
Rops7g02008 574 FunFam Serine/threonine-protein kinase D6PK-like 443 528 - -
Rops7g02008 574 SMART serkin_6 445 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02008 574 Pfam Protein kinase domain 446 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g02008 574 MobiDBLite consensus disorder prediction 53 81 - -
Rops7g02008 574 MobiDBLite consensus disorder prediction 319 334 - -
Rops7g02008 574 MobiDBLite consensus disorder prediction 299 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02008 Rops-Chr7 33417660 33422806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g02008 307 547 AGC Kinase Gene Family AT3G52890 56.432 1.38e-76 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops7g02008 Pkinase 1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02008 - - gmx:100789339 837.795