Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g02004 ATGGAATCCCAATTAGTTGATGGAAATGGCGGGATGGAAGTTTCTGGGGATGTTGGTTTGAATGCGTATGAAGTTCAGATAAATCCAGAAGCATATGAAGTGGATCCAAACGAGGGATGTAGGGTGCTAGAGAGTTCTTCTGGGGGAGAATTGGGTATCTCTGATGACCATGCTATTCAGGAACCATATGAAGGCATGGAATTCGAATCTGAAGATGTTGCTAAGATATTCTATGATGAATATGCCCGACATGTAGGATTTGTCATGCGTGTGATGTCTTGTCGACGGTCAGAAAGAGATGGTAGGATTCTTGCCCGCAGACTTGGATGTAATAAGGAGGGTTATTGTGTCAGCATCCGAGGGAAATTCGGGTCAGTTCGTAAACCAAGAGCCAGCACAAGGGAAGGTTGTAAGGCGATGATTCATATCAAATATGATAAGTCTGGAAAATGGGTGATAACAAAGTTTGTGAAGGAACATAATCATCCACTAGTAGTCTCTCCACGTGAAGCACGTCAAACCATGGATGAGAAGGATAAGAAAATTCAGGAATTAACAGCAGAGCTTCGGAATAAAAAACGGTTGTGTGCGACAAGATCTTTTGCACCAGACATAACCCTGCATTTTGTGTCTTGGTGTGACCACTAA 648 0.429 MESQLVDGNGGMEVSGDVGLNAYEVQINPEAYEVDPNEGCRVLESSSGGELGISDDHAIQEPYEGMEFESEDVAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFGSVRKPRASTREGCKAMIHIKYDKSGKWVITKFVKEHNHPLVVSPREARQTMDEKDKKIQELTAELRNKKRLCATRSFAPDITLHFVSWCDH* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g02004 215 Coils Coil 175 195 - -
Rops7g02004 215 Pfam FAR1 DNA-binding domain 77 165 IPR004330 -
Rops7g02004 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 50 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g02004 Rops-Chr7 33371405 33376519 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops7g02004 FAR1 8.9e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g02004 - - gmx:100793266 357.066