Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01993 ATGGCTTCCAAGAATGAGCAATTTGAAGCAGCTTTCTTTTCTTCTACCTTTCACCTGTATCTTTTCTGCTTTCCTCTTCTTATTATTATTGTGCTGAACCTGGTAAGATCCAAATTCAAACCCAATCTTAATCTGCCTCCATCCCCAACAAAGCTTCCAATAATTGGCAATCTTCATCAGCTAGGCACAATGCCACACCACTCTTTCAGAGCCCTCTCACAAAAACATGGTGCTCTGATGATGTTGCAGTTGGGGAACACTCAAGCTTTGGTGGTTTCATCTGCAGATGTGGCCAGAGAAATCATGAAAACTCATGACATAGCCTTCTCAAACAGACCCCAAAACACAGCTATTAAAACCTTACTCTATGGATGTAATGACATTGGTTTTGCACCCTATGGAGAAAGATGGAAAAAGAAAAGAAAAATATGTGTCCTTGAACTTCTAAGCACCAAAAGGGTGCAATCATTTCGTCTCATAAGAGAAGAAGTTGTTGCAGAATTGGTTAACAAGATAAGTGAAGCAAGCTCTAGTGATGCATGCTATGTGAATCTAAGTGAGTTGCTTATTGAAACAACAAACAATATCATATGTAAATGTGCTCTTGGACAGAAGTACAATCTGGAAGACTGTTATAGCAGGGTCAAAGAGCTAGCAAGAAAGGTGATGACACAAATTTCTGTTGTCACTGTGGGAGATCACTTCCCTTTATTGGGTTGGGTTGATGTTCTCACCGGCCAAATTCAAGAATTCAAGGCCACTTTTGGAGCATTGGATGTATTATTTGATCAGGTAATTGTGGAGCATAAGAGGGTGAAGATGGAAGCTGATCACTGCTCCAATGAGAAAGACTTTGTGGATATCCTCATCCAACTTCAGGAGGATGGAATGTCTGACCCTGAGCTCACCAATGATGACATCAAAGCAATTCTAATGGACATGTTTGCAGCAGGAAGTGGTACAGTTTCAGTAACACTAGAATGGGCTATTGCAGAGCTTGTGAAAAATCCAATGATATTGAAGAAAGCCCAGGAAGAGGTGAGAAGATTAGTAGAGAATAAATCAAAAGTAGAAGAAAATGACATCAACCAAATGGACTACATGAAATGTGTAATCAAAGAAACTCTAAGGTTACATCCACCTGCTCCTCTCTTGGCTCCTAGAGAGACATCATCAAGTGTGAAACTCAAAGGGTATGATATTCCAGCAAAAACAACAGTGTATTTCAATGCATGGGCAATCCAAAGGGACCCTGAATTTTGGGAAAGGCCAGAAGAGTTCATTCCAGAGAGACATGATAACAGCCAGGTTCATTTTAAAGGTCAAGATTTCCAATATATTCCATTTGGTTTTGGGAGAAGGGGATGCCCTGGAATGACATTTGGGCATGTTTCTGTTGAGTATGTGCTTGCCAACCTTCTTTATTGGTTTGATTGGAAGCTGCCTGCAACTGATACATCTGAACAAGACATAGACATGAGTGAGACATGTGGGCTTCTTGCCACAAAAAAAGCACCACTTCATCTTAAACCAATTCCATTCTCATTTGAATCCAAACTCTGA 1563 0.4037 MASKNEQFEAAFFSSTFHLYLFCFPLLIIIVLNLVRSKFKPNLNLPPSPTKLPIIGNLHQLGTMPHHSFRALSQKHGALMMLQLGNTQALVVSSADVAREIMKTHDIAFSNRPQNTAIKTLLYGCNDIGFAPYGERWKKKRKICVLELLSTKRVQSFRLIREEVVAELVNKISEASSSDACYVNLSELLIETTNNIICKCALGQKYNLEDCYSRVKELARKVMTQISVVTVGDHFPLLGWVDVLTGQIQEFKATFGALDVLFDQVIVEHKRVKMEADHCSNEKDFVDILIQLQEDGMSDPELTNDDIKAILMDMFAAGSGTVSVTLEWAIAELVKNPMILKKAQEEVRRLVENKSKVEENDINQMDYMKCVIKETLRLHPPAPLLAPRETSSSVKLKGYDIPAKTTVYFNAWAIQRDPEFWERPEEFIPERHDNSQVHFKGQDFQYIPFGFGRRGCPGMTFGHVSVEYVLANLLYWFDWKLPATDTSEQDIDMSETCGLLATKKAPLHLKPIPFSFESKL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01993 520 Gene3D Cytochrome P450 30 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Rops7g01993 520 Pfam Cytochrome P450 46 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 PANTHER CYTOCHROME P450 71B11-RELATED 31 512 - -
Rops7g01993 520 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 Coils Coil 340 360 - -
Rops7g01993 520 SUPERFAMILY Cytochrome P450 46 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 CDD CYP71-like 75 507 - -
Rops7g01993 520 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops7g01993 520 FunFam Cytochrome P450 83B1 33 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01993 Rops-Chr7 33205251 33207698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01993 21 512 Cytochrome P450 AT1G13110 42.376 1.44e-136 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01993 K20617 - gmx:100785621 770.385