Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01975 ATGGCTTCTCCTGTGAATCCATTGAGTAAAGTTTGTGTGGGTAGTCAATCCTGGAGGATTAAGGTCAGGATTGTACGTCTGTGGAAGGTTCCTACTTTTAACAATCCTTCTGTGACTAGCTCTATTGACATGGTTTTGATGGATGAACATGGTGAAAAAATCCAAGCCTCTGTGAGAAAGACACTGGTTCACAAATTTGCAGATGTTCTTCAAGAGGGGAGTGTTTATTTCTTTAGTTGCTTTATTGTCATCCCTAATATTGGGTCATACAGGGCAACTAGCCACCCATGTCGATTGCTTTTTTTATTCAAGACCAAACATGCTAAGACTGATTCTGTTGTTATCCCTTATCATGGTCTGAGTTTGGTTCCATTTGTAGATGTGCTTAAGCATGAAGCTGATTCTGACTATTTGGTTGATGTTATTGGATTGCTTACTTCAGTTTCTCCTGAGAGAGTTATTGAGAAGGATGGAAAGTTTTCAAAAATGATCGTGATTGAACTCACATCTGATCAGTGA 519 0.3911 MASPVNPLSKVCVGSQSWRIKVRIVRLWKVPTFNNPSVTSSIDMVLMDEHGEKIQASVRKTLVHKFADVLQEGSVYFFSCFIVIPNIGSYRATSHPCRLLFLFKTKHAKTDSVVIPYHGLSLVPFVDVLKHEADSDYLVDVIGLLTSVSPERVIEKDGKFSKMIVIELTSDQ* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01975 172 CDD RPA1_DBD_A_like 19 106 - -
Rops7g01975 172 Pfam Domain of unknown function DUF223 44 138 IPR003871 -
Rops7g01975 172 Gene3D - 3 111 IPR012340 -
Rops7g01975 172 Gene3D - 114 172 IPR012340 -
Rops7g01975 172 SUPERFAMILY Nucleic acid-binding proteins 5 109 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01975 Rops-Chr7 32891238 32892004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01975 1 156 Core DNA Replication Machinery Family AT5G08020 27.711 3.46e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01975 - - mtr:11425976 166.392