Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01967 ATGCGCTCTTTCTACCTATATCTGTTTCGGACTTTTTCTCTCCCTCTCCTTGTGCAAGAAAACAAACATTTTTCTTTTCATATAAAACTGCTTTGGGAATTGCATACTAATGGCGGGGTGACCGGTCACAACAACCAGACCAGGTTATCCCCAAGCCCCCTTGTCTCTGCAAAATTGTCTCTAGTTTTGTTGGCAACTCCTTCAGATCTCATGGCGTTAATGAAGGGTCATATGGAAACTTCAAATGGTTTATCAAACTTGAGAAACTCTCCTCCACCCACAGGAACACCACTTCTATTGCCCCCTAAGAATACATCTGAGGATGAATGTTTCTCCCATTCAGCTGCTGAATTTGAAGGATTCTCAGTGCCCAAAGAGGGAATACGACGCCACCAACGTACATATTCTGATAGCATGCTAACTGAGGACATACCCTTTTGGTTGAAAGAACTCCTTGATGAGCCTGAGACACCTCCTCCAAGCAAGAGTCATAGAAGATCATCAAGTGACTCCCTAGCATACTTGCAATTACAAAAAACAGATGAGGCATCTGAATGGAAGGATCATGGGAGCAAACAAACTGATTATGTTACATTTCCAAGTTCAGCCATTCCTCAGGCGTCAGATGCCACACAATTAGAAAAGTTTGAGAAACAAAATGTGGCAGACCCACAAGACTCCTTTGTGCAACCTCATTGCTTACATTCCAATCCTTCTGCAAGTAGAACAGATTCAAAACGTGCCAAAAGGTATTCAGCTCAACAATACCGGGCCAGGAAAGTTCAATACATTGCTGAACTGGAAAGAAGTATCCAAGCTTTACAAGCTGAAGGATACGAATTTTCAGCAGAGCTTGAATTTCTTGATCAACAAAACCTCATATTAGGTATGGAGAACAGGGCCCTCAAACAACGGTTGGAAAGTTTATCCCAAGCGCAGTTCATCAAATGCTTGGAGCAAGAAATGCTTGAGAAAGAAATCACAAGGCTTCGGAATCTTTATCAACAGCAACAACAAAAACAGCAGCAGAAGCATTATGGTAGGCCTCGATCCAAACGTCAAGATCTTGATTCCTCATTTGCCAAACTTTCTTTGAAGAATAAAGGAGCTGAATTGCAGAAAGCCTGA 1128 0.422 MRSFYLYLFRTFSLPLLVQENKHFSFHIKLLWELHTNGGVTGHNNQTRLSPSPLVSAKLSLVLLATPSDLMALMKGHMETSNGLSNLRNSPPPTGTPLLLPPKNTSEDECFSHSAAEFEGFSVPKEGIRRHQRTYSDSMLTEDIPFWLKELLDEPETPPPSKSHRRSSSDSLAYLQLQKTDEASEWKDHGSKQTDYVTFPSSAIPQASDATQLEKFEKQNVADPQDSFVQPHCLHSNPSASRTDSKRAKRYSAQQYRARKVQYIAELERSIQALQAEGYEFSAELEFLDQQNLILGMENRALKQRLESLSQAQFIKCLEQEMLEKEITRLRNLYQQQQQKQQQKHYGRPRSKRQDLDSSFAKLSLKNKGAELQKA* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01967 375 CDD bZIP_plant_RF2 242 292 IPR044759 GO:0003700|GO:0006355
Rops7g01967 375 Gene3D - 244 298 - -
Rops7g01967 375 MobiDBLite consensus disorder prediction 226 241 - -
Rops7g01967 375 SUPERFAMILY Leucine zipper domain 250 295 IPR046347 GO:0003700|GO:0006355
Rops7g01967 375 MobiDBLite consensus disorder prediction 152 171 - -
Rops7g01967 375 SMART brlzneu 241 301 IPR004827 GO:0003700|GO:0006355
Rops7g01967 375 Coils Coil 257 277 - -
Rops7g01967 375 MobiDBLite consensus disorder prediction 226 249 - -
Rops7g01967 375 Coils Coil 320 343 - -
Rops7g01967 375 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 94 216 IPR044797 -
Rops7g01967 375 MobiDBLite consensus disorder prediction 335 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01967 Rops-Chr7 32672562 32676915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01967 244 316 bZIP Transcription Factor Family AT2G42380 51.282 1.09e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01967 - - lja:Lj0g3v0293819.1 258.84