Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01932 ATGTGGAAATTTAAGCCATTCATGCACAAAGAGCCAACTGGTCTTGAAGGCCGTTCTATAGACGTTGGAAATCTTAAAATACATGTCCACAAAGTCATTGCTGAAGGAGGGTTCTCGTCTGTGTACTTAGCTCGTGATGCTGTACATATGTCAAAACAATATGCTTTGAAGCACATAATATGCAATGATGAAGAATCCCTTGGATTGGTAAAGAAGGAGATATCCGTGATGAAATTGCTGGTAGGACATCCCAATGTTGTCACACTTCATGCACATGCAATCTTTGATATGGGAAGGACAAAAGAGGCATTCATTGTAATGGAGTTTTGTGAGAAGTCTCTGGTTAATGTGTTGGAGAGCCGAGGAGCTGGTTATTTTGATGAGAAACAGGTTCTTTTAATCTTTAGGGATGTGTGTAATGCAGTTTTCGCGATGCACTGCCAGTCCCCACCTATTGCTCACCGAGACTTGAAAGCAGAGAATCTTTTATTAGGTTCAGATGGTTTGTGGAAGTTGTGTGATTTTGGAAGCACTTCCACCAATCACAAACGTTTTGAGAAGCCAGAAGAAATGGGGATTGAGGAAGATAATATCAGGAAGTACACAACCCCTGCCTACAGAGCTCCCGAGATGTGGGACCTGTTCATGAGAGAAGTCATTAATGAGAAAGTGGACATTTGGGCACTCGGGTGTCTCCTTTTTCGTATATGCTACTTCAAAAGTGCATTTGACGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCTGATTTACCTAAATACAGTTCATTTGTCACGGACATAATCAGAGACATGCTTCAAGCTAAACCAGATGACAGACCAGATATCACGCAGGTTTGGTTTCGTGTTAATGAGCAGCTACCAGTTAATTTACAGAAGTCATTACCCGACAGGCCACCTGAATCGCCCTCTTCAAACAATCACGAAGGTGCTTCAATGTCCACAAACAAATCACCTCCAATGCCTCGTAGGAACCCACCTCCTCCACCTTCACATGGGGAACCCAAAACTACACCTCAGCAATCCCTTGCTTCTAGGGGTGGGGGAAATGGGGGGCACCTTGGTGCTTTCTGGACAACTCAGCATGCAAAGGACTCACTTGTCCTCGAGGAAAAGAGCAAACCTGTATATGATGAAGAACCGTCTAGCCACCATATGTCATCGAAACATGATAGAATTACTCCGAACAATGATCAAATACCCAAAAATGTTACTACTAAGAAAGTGGTTAACCCACAAACTCATACTGTAAAAAGCAGTATACATGGAAAATTACACAAGCCTGATACCATGTCTTCCAAGGACTTCGAAATAAAAAATTTTCAGGATAAAGATGATGCAAGTGAGAGGCAAATGTCAAGTATGGAGAATAATACTAACTTTCAAGACCAGGCATTTAACACTTTCGTTGCAGAATTTGATACCACTATGCTCAACTCTGGACTTCGTGACAAATCCGAAAGGGAAGAAGCATTAAAAGCTGAGGTGGAGAAACTCAAAGAACATCTGAAGAAAGTTAACATGGAGAAAGCTGAAATAACTTCGAAGTATGAAAAGCTTTCTGCTATTTGCCGATCACAAAGGCAAGAATTGCAGGATCTCAAGCAAGCGCTTGCTGCAAGGACTCCATCTCCAAGTAGAGAGGGTTTGAAAACCTCTCCTAGAATTACATCACCTGCATCTACGAGGGAGAAGATTGGTGGGACTGCTTGGGAACATCAGACTCCTAGTTCAGAACCAAAGTCATGGCAAGCTTTTACGGAGGAACCTGAACCTGTGAAGTCCCTTTCAGCAGACAATACTTCTAAATCTGTGAGGACAAAAAATGGTCAGCAGAACAAGCAGCCTACTCAACTAGCTTCTGATTTTGATACATGGGGTTTTGGGACAGATCAATTCAGTGCTGTGCGCGCTGGCAGCCCGCAGATGCCAAGACCTAGTGAAGGGAGTAAAGCTCAGGTGTTTGGTGAGGCAAAGGCCTTTGAGAGTAAGTCAACTTCTCAACCTGCTGGATGGGCTGGTTTTTAA 2058 0.431 MWKFKPFMHKEPTGLEGRSIDVGNLKIHVHKVIAEGGFSSVYLARDAVHMSKQYALKHIICNDEESLGLVKKEISVMKLLVGHPNVVTLHAHAIFDMGRTKEAFIVMEFCEKSLVNVLESRGAGYFDEKQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFMREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSFVTDIIRDMLQAKPDDRPDITQVWFRVNEQLPVNLQKSLPDRPPESPSSNNHEGASMSTNKSPPMPRRNPPPPPSHGEPKTTPQQSLASRGGGNGGHLGAFWTTQHAKDSLVLEEKSKPVYDEEPSSHHMSSKHDRITPNNDQIPKNVTTKKVVNPQTHTVKSSIHGKLHKPDTMSSKDFEIKNFQDKDDASERQMSSMENNTNFQDQAFNTFVAEFDTTMLNSGLRDKSEREEALKAEVEKLKEHLKKVNMEKAEITSKYEKLSAICRSQRQELQDLKQALAARTPSPSREGLKTSPRITSPASTREKIGGTAWEHQTPSSEPKSWQAFTEEPEPVKSLSADNTSKSVRTKNGQQNKQPTQLASDFDTWGFGTDQFSAVRAGSPQMPRPSEGSKAQVFGEAKAFESKSTSQPAGWAGF* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01932 685 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01932 685 MobiDBLite consensus disorder prediction 330 345 - -
Rops7g01932 685 PANTHER SERINE/THREONINE PROTEIN KINASE 1 668 - -
Rops7g01932 685 Coils Coil 448 468 - -
Rops7g01932 685 MobiDBLite consensus disorder prediction 556 574 - -
Rops7g01932 685 MobiDBLite consensus disorder prediction 300 329 - -
Rops7g01932 685 MobiDBLite consensus disorder prediction 548 636 - -
Rops7g01932 685 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01932 685 MobiDBLite consensus disorder prediction 425 446 - -
Rops7g01932 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Rops7g01932 685 SUPERFAMILY Protein kinase-like (PK-like) 28 342 IPR011009 -
Rops7g01932 685 Coils Coil 492 547 - -
Rops7g01932 685 CDD STKc_GAK_like 26 298 - -
Rops7g01932 685 MobiDBLite consensus disorder prediction 432 446 - -
Rops7g01932 685 MobiDBLite consensus disorder prediction 604 636 - -
Rops7g01932 685 MobiDBLite consensus disorder prediction 300 367 - -
Rops7g01932 685 MobiDBLite consensus disorder prediction 385 413 - -
Rops7g01932 685 Gene3D Transferase(Phosphotransferase) domain 1 11 306 - -
Rops7g01932 685 Pfam Protein kinase domain 28 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01932 685 MobiDBLite consensus disorder prediction 385 406 - -
Rops7g01932 685 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01932 Rops-Chr7 31918916 31923696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01932 26 292 Miscellaneous Gene Families AT2G34180 29.537 4.10e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Rops7g01932 Pkinase 3.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01932 K08853 - gmx:100808507 1075.08