Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01925 ATGGAAAACAACCAAAACCACAACCCAGACCCAAAACCAAACCTAGAGAAGAACCACCAGGCCTGGGGCACGTGGGAAGAGCTCTTGCTAGCGAGCGCCGTCAACCGCCATGGCTTCAAGGACTGGGACACCGTTGCCATGGAGGTTCAGTCCCGAACCACCCGCCCTCACCTCCTCGCCACCGCACACCACTGCGAGCAAAAATTTCACGATCTCAACCGCCGATTCACCGACCAATGCAACGACGACGTTTCGTCACCTCGACAGAACGGCGCCATCTCCGGCGTGAACTCCGATCACGTCCCCTGGTTAGATGAATTACGGAAACTCCGTGTCGCCGAACTCCGGCGAGAGGTCCAAAGCCGTGACGTTTCCATTTCGTCGTTGCAGTCGGAGGTGAAGAGATTAGAGGAAGAGAAAGAGAAAGAAAATGAGAGAAAAGAAGACAAGAAACCAGATCTGGCGGTTTCCGGTGAGGAACGGCCGGAAAAAGACAAAACCGGCGGAGAATTAGAAGAAGCTGGACCGGCTAATTCTGAACCGGAGATTCGTCGGCTCGATGAGAGCACCACTAACACGGATAAGCTTCAACCAACAACAGGTGATGAATCGGACCGGGAGAATCAATCGGTTAATGAGTCAAACTCAACCGGTTCGCGGTTCGAGATAGTAAAAACCGGTGAAGGTGACGTTAAGTTAGGACCTAGACCGGTTCAGGTTCATTCCGGTCCAAAAGAACCGGATCCGGTTGGGAGAAAGAGAAAACCGGTTGGTGAAGAATCGAATAACGGAAGCTATGATAACGAGGCTAAGGTTCCAACGTATGAGTCGGTGCCTCCGAGTGAGGAACGGAAAGTTGAGGAGGACTCGTCCGAGTTGCATGACTCGGTGGCTCACTCGGGGGAGGGAGGGACGAGAGAGAGTAGCGATGTGCAGAGTTCTGCGAGCTTAACGAGGAAACGGAAGACGCGCCAGAGGAAGGAGGTTTCCGGTGGTGGAGAGGTGGTGCCGGAGAATGGTGAGGTTGCGATGATGAAATCAGAACCGTTGGTTAGCGTGTTGGAGTTGATCAAAGGACATGAGAACGTTTCATTGTTCGAGCGCCGTCTTGAAAGCCAGCAGGACTCAGATAGATACAAAGACCTTGTGAGACAGCACGTGGACTTGGAAACCATACAATCGAGACTCCAAAAGGGTCACTATTCTTCATGCACCAACGCATTCTTCCGCGACCTCCTCCTCCTCTTCACCAATGCCACCGTGTTCTTCCCCCAAGACTCCGCTGAATCACGGGCGGCGCAGCAGCTGCACCGCCTTGTCATCTCCGAGATAAGAAGCCATGGCCAATCACAGTCCGACTCTATCCCCCAAAAGAACGACTCACTCCCTACAAATGCACCATCAACCAAACCAGAGTCTCTTCTTTCCAAGCACAAAGCCTCTGCTCCTATATTAGTTTGCCGCAAACACCGTTCCATGTCATCCAAACCTTCCTCAGCCACCTTTGGTCAAAAGGGTGATCACCAACCCATCATCAATGACAAGAAGGAAAGGCCACCTTCTGATGCGAAACCACCCTTGAAACCTTCTTCTTCCGATACAGATGAAGATGAGCCTCCCAAGGTTAAGGAAAAGCCTGTCACTGGAGCTAGAAGCCTTAGGAGAAGCAACAAGAACCTCAACAGCAACCCTGGCAATAAGAAACTCCCTTCTAACTCCACTCCTAAAGCAGGGTCATCGGCGAATAAGCCTGCCGAGACCCTGAAACCGGAGAAGAGCAAAGCAGAGGCGGTACCAGACAAGAAGAGGAATGCCGCTGCTGATTTCTTGAAACGGATAAAGCGAAACTCTTCTGTGGAAGTGCTCCGAAGTGGTGGTGGTGGAGGAGGAGGAAGTAGTAGCAGTAGCAGGGGTGGTGGAGGTGGTGCAAGTGTGAAAGAGCAGAAGAAAGTGGTGAATAGTGGAAAGGGAGACAAAGGGAAAGAAAAGACTTCGAGGCACAACGTTGGAGGGTCAGGGGATAAAAGGAATAAGAATATTGAGAACAATTCTCAATCGAAGAGAAGTGTTGGAAGACCTCCAAAGAAAGCACCAGAGACTAGTGTTGGTTCAAAGCGTGGGAAGGAAAGTAGTGCTAGTGGTGGAAAGGATAAGCGACCAAAGAAACGTGCTAAGAAATGA 2181 0.5122 MENNQNHNPDPKPNLEKNHQAWGTWEELLLASAVNRHGFKDWDTVAMEVQSRTTRPHLLATAHHCEQKFHDLNRRFTDQCNDDVSSPRQNGAISGVNSDHVPWLDELRKLRVAELRREVQSRDVSISSLQSEVKRLEEEKEKENERKEDKKPDLAVSGEERPEKDKTGGELEEAGPANSEPEIRRLDESTTNTDKLQPTTGDESDRENQSVNESNSTGSRFEIVKTGEGDVKLGPRPVQVHSGPKEPDPVGRKRKPVGEESNNGSYDNEAKVPTYESVPPSEERKVEEDSSELHDSVAHSGEGGTRESSDVQSSASLTRKRKTRQRKEVSGGGEVVPENGEVAMMKSEPLVSVLELIKGHENVSLFERRLESQQDSDRYKDLVRQHVDLETIQSRLQKGHYSSCTNAFFRDLLLLFTNATVFFPQDSAESRAAQQLHRLVISEIRSHGQSQSDSIPQKNDSLPTNAPSTKPESLLSKHKASAPILVCRKHRSMSSKPSSATFGQKGDHQPIINDKKERPPSDAKPPLKPSSSDTDEDEPPKVKEKPVTGARSLRRSNKNLNSNPGNKKLPSNSTPKAGSSANKPAETLKPEKSKAEAVPDKKRNAAADFLKRIKRNSSVEVLRSGGGGGGGSSSSSRGGGGGASVKEQKKVVNSGKGDKGKEKTSRHNVGGSGDKRNKNIENNSQSKRSVGRPPKKAPETSVGSKRGKESSASGGKDKRPKKRAKK* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01925 726 MobiDBLite consensus disorder prediction 651 674 - -
Rops7g01925 726 MobiDBLite consensus disorder prediction 445 726 - -
Rops7g01925 726 MobiDBLite consensus disorder prediction 246 260 - -
Rops7g01925 726 MobiDBLite consensus disorder prediction 445 475 - -
Rops7g01925 726 MobiDBLite consensus disorder prediction 552 581 - -
Rops7g01925 726 Coils Coil 126 153 - -
Rops7g01925 726 MobiDBLite consensus disorder prediction 278 301 - -
Rops7g01925 726 Pfam Bromodomain 353 434 IPR001487 GO:0005515
Rops7g01925 726 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 10 726 - -
Rops7g01925 726 SMART sant 18 75 IPR001005 -
Rops7g01925 726 MobiDBLite consensus disorder prediction 492 506 - -
Rops7g01925 726 Pfam Myb-like DNA-binding domain 20 54 IPR001005 -
Rops7g01925 726 Gene3D - 339 455 IPR036427 GO:0005515
Rops7g01925 726 MobiDBLite consensus disorder prediction 675 690 - -
Rops7g01925 726 MobiDBLite consensus disorder prediction 133 338 - -
Rops7g01925 726 CDD Bromodomain 350 444 - -
Rops7g01925 726 MobiDBLite consensus disorder prediction 587 618 - -
Rops7g01925 726 SMART bromo_6 343 449 IPR001487 GO:0005515
Rops7g01925 726 MobiDBLite consensus disorder prediction 509 551 - -
Rops7g01925 726 MobiDBLite consensus disorder prediction 133 191 - -
Rops7g01925 726 SUPERFAMILY Homeodomain-like 14 54 IPR009057 -
Rops7g01925 726 CDD SANT 21 53 IPR001005 -
Rops7g01925 726 Gene3D - 14 72 - -
Rops7g01925 726 ProSiteProfiles Bromodomain profile. 358 430 IPR001487 GO:0005515
Rops7g01925 726 SUPERFAMILY Bromodomain 348 447 IPR036427 GO:0005515
Rops7g01925 726 MobiDBLite consensus disorder prediction 302 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01925 Rops-Chr7 31825511 31830527 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops7g01925 Bromodomain 8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01925 - - gmx:100811021 982.245