Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01920 ATGAGGGCATTTTTGGTACAAAATGGTCTTGTAGAGGCTCTTTCGGACGACGAAGGTATAACTTCTATCTCAACCTCTATTAAGAGCTTAGATGTGAAAAATGACATCTTGGTTATGGCACACATTGCCTTGATCTTCTCACTGGGTGACAAGGTCTTGAGGGAAGTGGCCAATGAGACCACTACAACTAGGGTCTGGGAAAAATTGGAGAGACTTTACACGACAAAGTCTTTGGCCAATAGGTTGTACAAGAAAACGAAGTTCTACACCTTTAAAATGAGCCCGGTCAATTTGCAGGGGAGGTCTCGCTGCTCGCTGCTCGCTGCCCCCTACGCCGCCACCGTCTACCGGAAATCCACCGTCGTGAGATCCGCGTCTCCATCTTCTCCAACTCCTCTCTCTGTGTCTCCGTTCATCACAGATTCAGGATTGCACAAACTCCTAGCAGATGATGTTGGTTTTTCCACCCTCAAAGCCAGTGCAGCCATGGGATATCTGGCCCCAGAATACACAACAACTGGTCGTTTGACTGAAAAGAGTGATGTCTATGCATTTGGGGTGATAGTTTTCCAGCTTCTCACTGGAAAACGTGATGTCACTCAGTTAAGTCGCCAACGGGTAGAAAGTGCTGGTTTTAAAGATATAGTTGATGAGAATCTTGAAGGGAAGTTCTCAGAATTAGAGGCAGCCAAATTGTGGAGAATTGCTTTGCTTTGTACCCATGAATCTTCCCATCTCAGACCACCTATGGACAATGTAATGCTGGAACTTTGTGATAGACAGTATCAGTTCATGCCATGA 801 0.4582 MRAFLVQNGLVEALSDDEGITSISTSIKSLDVKNDILVMAHIALIFSLGDKVLREVANETTTTRVWEKLERLYTTKSLANRLYKKTKFYTFKMSPVNLQGRSRCSLLAAPYAATVYRKSTVVRSASPSSPTPLSVSPFITDSGLHKLLADDVGFSTLKASAAMGYLAPEYTTTGRLTEKSDVYAFGVIVFQLLTGKRDVTQLSRQRVESAGFKDIVDENLEGKFSELEAAKLWRIALLCTHESSHLRPPMDNVMLELCDRQYQFMP* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01920 266 Gene3D Transferase(Phosphotransferase) domain 1 127 264 - -
Rops7g01920 266 Pfam Protein tyrosine and serine/threonine kinase 139 256 IPR001245 GO:0004672|GO:0006468
Rops7g01920 266 SUPERFAMILY Protein kinase-like (PK-like) 137 254 IPR011009 -
Rops7g01920 266 Pfam gag-polypeptide of LTR copia-type 40 95 - -
Rops7g01920 266 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 137 260 - -
Rops7g01920 266 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01920 Rops-Chr7 31614498 31621500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01920 133 256 Receptor kinase-like Gene Family AT1G53430 37.226 2.69e-21 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Rops7g01920 PK_Tyr_Ser-Thr 1.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01920 - - qsu:111997683 186.422