Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01918 ATGAATGCACGTGTTTCCCCTATTTCCTTGACTTATTATGGGCTTTGCCTATCAAATGGAAACTACACAGTAAAGCTCCACTTTGCAGAGATTATGTTCACTGATGATAACACATTTAGCAGCCTAGGCAGACGTGTATTTGATGTCTACATTCAGGGAAAACGGGTATTGAAGAATTTCAATATAAAAAGTGAAGCACAAGGAGTTAGTAAGGCGCTAACAAGAACATTTTCTGCTTATGTCAGTAGTAATGACTTAAAGATCCGCTTCTATTGGGCCGGGAAAGGGACAACCTTAATTCCATATCCATCAGTATATGGTTCTCTTATATCGGCTATATCTGTCACTTCTGACTTTCCACCTCCATCGAAAAATATGTCTACAAGGGTTGTGGTTGGAATTGTGGCTGCAATACTGGTTATTGTCATCTTGATTGTTTATTTACTTTGGTGGAGAGGTTGTTTGGGGAAAAGAAACTCATTAGTTAAAGAGTTAAAGGATTTAGAAATGCAAACCGGTTTATTTACATTGCGTCAAATCAAAGCAGCAACAAATAATTTTGATATTGCCAATATGATAGGAGAAGGAGGCTTTGGTCCTGTTTATAAGGGCACTTTGTTGGATGGCACAACAATAGCAGTCAAACAACTTTCATCAAAATCAAAGCAAGGGAATCGTGAGTTCATAAATGAGATAGGCATGATCTCAGCTTTGCAACACCCTCATCTTGTCAAACTATATGGTTGTTGTGTTGATGGAGATCAGTTGTTGCTAGTGTATGAATACATGGAAAACAATAGCCTTGCAAGTGCTTTGTTCGGCCCTGAAGCAACCCGTTTAAAATTGAATTGGCCAACAAGGCACAAGATCTGTGTTGGTATTGCTAGAGGGTTGGCTTTCTTGCATGAAGAATCAAGATTGAAAATTGTTCATAGAGACATTAAGGCCACTAATGTGTTGCTTGATAAAGATTTGAACCCAAAGATATCTGATTTTGGTTTAGCCAAGCTCAATGAGGAGGACAATACTCATATTAGCACTCGAATTGCTGGGACCTAG 1059 0.3862 MNARVSPISLTYYGLCLSNGNYTVKLHFAEIMFTDDNTFSSLGRRVFDVYIQGKRVLKNFNIKSEAQGVSKALTRTFSAYVSSNDLKIRFYWAGKGTTLIPYPSVYGSLISAISVTSDFPPPSKNMSTRVVVGIVAAILVIVILIVYLLWWRGCLGKRNSLVKELKDLEMQTGLFTLRQIKAATNNFDIANMIGEGGFGPVYKGTLLDGTTIAVKQLSSKSKQGNREFINEIGMISALQHPHLVKLYGCCVDGDQLLLVYEYMENNSLASALFGPEATRLKLNWPTRHKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLNEEDNTHISTRIAGT* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01918 352 Pfam Protein tyrosine and serine/threonine kinase 189 344 IPR001245 GO:0004672|GO:0006468
Rops7g01918 352 Gene3D Transferase(Phosphotransferase) domain 1 263 352 - -
Rops7g01918 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Rops7g01918 352 SUPERFAMILY Protein kinase-like (PK-like) 170 352 IPR011009 -
Rops7g01918 352 Pfam Malectin domain 2 113 IPR021720 -
Rops7g01918 352 Gene3D Phosphorylase Kinase; domain 1 155 262 - -
Rops7g01918 352 ProSiteProfiles Protein kinase domain profile. 187 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01918 352 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 156 262 - -
Rops7g01918 352 FunFam Os07g0541700 protein 263 352 - -
Rops7g01918 352 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 352 - -
Rops7g01918 352 SMART serkin_6 187 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01918 352 Gene3D - 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01918 Rops-Chr7 31578825 31581359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01918 3 352 Receptor kinase-like Gene Family AT1G53420 66.193 1.43e-164 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01918 PK_Tyr_Ser-Thr 9.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01918 - - gmx:732563 535.028