Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01877 ATGGAATCCAAAGGTGAAGTGAGAAGGCTTCATATCATCTATATTCTCAGTCATATGGGTGGTCGTTCAGAGCATCCCCATCTCATTCGTGTTCTCCATTTAGCTCGTAATGGTGTTTATCTCAGAGATGTGAAGAGATGGCTTGGGGAATTGAGAGGAAAAGATTTACCTGAAGCTTTTGCGTGGTCCTATAAGAGGAGGTACAAGACTGGATATGTGTGGCAAGATTTGTTGGATGATGACCTCATAACCCCCATTTCTGACAATGAATACGTCCTCAAAGGATCACAAATCCACTCTACCCCATTTGAAACTCATTCACTGGATGAAAAGAAAACTGCTACTGATATGCTGGCGGAGAAGAAAGCCCCTCAAGTACAAGTTGCAGAGGACAGACAACAGCACCAGCAGCAGCCAGAAGAAGAACCAGAAATTCAACAAGAGCCAGTTTCAAAAACGGATACTCCAACAAAAGTGTCATCAGAAATCAGCCAGGATTCATTGGTTTTCAGCTCAGACAGGTCATCTGTGACAGATGATGAGTCTTCTAAGGTTGAAGAAGAGAAGCTTTTGGAGACAGGCAAAGAGGGTTTCAATGAACAGAACAATGGGGAGGTAGAGACTTCCTCATTGCCTTCCTTGTATCACAATCTGTTGAGTAAGAAGGGTAACAAAGATGATCAGAATAAAACTGATACACCTGATTCATCGTTTTCTACTACATCAACATCATCATCTCAATTCTCTTCTACTAAGATCAGAAGCAATTCCACTAGAGTTTCTAATGTGTTCCGCACTTGGATTACTTGTGGGACTGTGGAAACAAATGATGCAGCCCTGGTCCTGAGGAATCACAAAACTGTCTCCAAGGAGACTCACAACATACCCGAAAGAAAGGCTGAGATTTGTAAAGGAGACAAATTGGGATTGTCAGCCAGGTGTTTTAGAACTTCTTGGAATTATCATCACCAGAATGAACAATATGGAGCCAGAAAAAGCTGTGATGGAGAGGAAACAAACAGGAGCAAGACAATGTTTGGCGAGTTCATGAATCAAATTCCTTACAAACCACTTGGAGGACCAATATGCTCGCAATGTGGGAAGTCGTTCAAGCCTGAGAAAATGCACAAACACATGAAGTCTTGTAAAGGAATGAAAGCAATGGGAACGTTAGCGACAACTGCTGAGGAGAGACAGCTTCAGAGATCATCAACTCCACTCTATTCAAATTACCTATTAACCAACTAA 1248 0.4207 MESKGEVRRLHIIYILSHMGGRSEHPHLIRVLHLARNGVYLRDVKRWLGELRGKDLPEAFAWSYKRRYKTGYVWQDLLDDDLITPISDNEYVLKGSQIHSTPFETHSLDEKKTATDMLAEKKAPQVQVAEDRQQHQQQPEEEPEIQQEPVSKTDTPTKVSSEISQDSLVFSSDRSSVTDDESSKVEEEKLLETGKEGFNEQNNGEVETSSLPSLYHNLLSKKGNKDDQNKTDTPDSSFSTTSTSSSQFSSTKIRSNSTRVSNVFRTWITCGTVETNDAALVLRNHKTVSKETHNIPERKAEICKGDKLGLSARCFRTSWNYHHQNEQYGARKSCDGEETNRSKTMFGEFMNQIPYKPLGGPICSQCGKSFKPEKMHKHMKSCKGMKAMGTLATTAEERQLQRSSTPLYSNYLLTN* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01877 415 MobiDBLite consensus disorder prediction 149 176 - -
Rops7g01877 415 MobiDBLite consensus disorder prediction 134 148 - -
Rops7g01877 415 MobiDBLite consensus disorder prediction 196 217 - -
Rops7g01877 415 MobiDBLite consensus disorder prediction 177 195 - -
Rops7g01877 415 MobiDBLite consensus disorder prediction 122 252 - -
Rops7g01877 415 MobiDBLite consensus disorder prediction 233 252 - -
Rops7g01877 415 Pfam Protein SOSEKI, plant 12 300 IPR010369 -
Rops7g01877 415 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 4 400 IPR010369 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Rops7g01877 DUF966 8.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01877 - - gmx:100785001 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01877 7 30170619 30173325 Rops7g01877 7 30170619 30173325 ECH