Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01867 ATGAAAGCCATTGAAGAGTCCATGTTTGCTCTCATCATTCTCTCACCAAACTATGCTTCCTCAACATGGTGTTTGGATGAGCTCCAAAAGATTCTTGAGTGCAAGAACACTTTTGGTCAAGATGTTTTTCCAATCTTCTATGGTGTAGACCCCTCTGATGTAAGGCATCAAAGGGGAAGCTTTGCCAAAGCTTTCAGAGAACATGAAGAGAAATTCAAACAAGACAGACAGAAAGTGGAAAGATGGAGAGATGCCTTAAGACAAGTTACAAGTTTCTCTGGTTGGGACTCCAAGGATAGTACATTGAAAACTAAACTTGAGACCTTGAGTGGAAAGGTAACCGATAAAATTCAAGGTATAGTTCTGAACTCAGTTCGACCATATGAAGCACGCTGGAGCACTGAAGCCTTCTCCAAGACAAGTCAGCTAAGATTACTCCAGTTAGGTGACATTCAACTTCCCCGTGGTCTCAACAGCCTTCCTAGTGCACTGAAAGTTCTTCATTGGAGAGGATGTCCTTTGAAAACCTTGCCACTTACTAATCAACTGGACGAAATTGTTGACCTCAAATTGGCTCATAGCAAAATAGAACAACTTTGGCATGGAACAAAGTTTCTTGAAATGCTGAAGTCCATCAATTTGAGTTTTTCCAAGAATCTAAAGCAATCCCCTGACTTTGTTGGGGTTCCAAATCTTGAATCATTGGTTCTTGAAGGTTGTATGAGCTTAACTCAGGTTCATCCATCCCTTGTATGCCACAAGAAACTTATTCTAATGAATTTGAAGGATTGCAAAAGACTCAAGGCTCTTCCATGTAAAATGGAGATGAGTTCCTTGAAGGATTTAAATCTTTCTGGTTGCTCTGAATTTAATTATCTTCCAGAGTTTGGGGAAAGCATGGAAAATCTATCAAAGCTTTCTTTAGAGGGGACTGCTATAACAAAACTACCCTCATCACTGGGATGTCTAGTTGGCCTTGCTCACTTGGATTTGAAGAATTGCAAGAATCTTGTTTCCCTTCCAGATACCATTGGTGAATTGAAGTCCCTCTTAAATCTGAATGTTTCTGGCTGCTTAAAACTCCGTAGCTTGCCAGAGAGTTTAAAGGAAATCAAGTGTTTAGAGACACTTCTTGCAAGTGAAACTGCTATTGAGGAGCTACCTTCATCTGTCTTTTATCTGGAAAATCTCATATCAATATCGTTTGCTGGATGCAAAGGGCCAGTGTCTAAGTCAGTGAATATGTTTTTTTCCCCTTTAAGTGGTTGTTTGGGAGTCAGCAAGATCCTATTGGATTTAGATTGCCACCTTCTGTGTTGTGTCTACCCTCTTTGA 1335 0.4022 MKAIEESMFALIILSPNYASSTWCLDELQKILECKNTFGQDVFPIFYGVDPSDVRHQRGSFAKAFREHEEKFKQDRQKVERWRDALRQVTSFSGWDSKDSTLKTKLETLSGKVTDKIQGIVLNSVRPYEARWSTEAFSKTSQLRLLQLGDIQLPRGLNSLPSALKVLHWRGCPLKTLPLTNQLDEIVDLKLAHSKIEQLWHGTKFLEMLKSINLSFSKNLKQSPDFVGVPNLESLVLEGCMSLTQVHPSLVCHKKLILMNLKDCKRLKALPCKMEMSSLKDLNLSGCSEFNYLPEFGESMENLSKLSLEGTAITKLPSSLGCLVGLAHLDLKNCKNLVSLPDTIGELKSLLNLNVSGCLKLRSLPESLKEIKCLETLLASETAIEELPSSVFYLENLISISFAGCKGPVSKSVNMFFSPLSGCLGVSKILLDLDCHLLCCVYPL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01867 444 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 95 IPR035897 -
Rops7g01867 444 SMART till_3 1 92 IPR000157 GO:0007165
Rops7g01867 444 Gene3D Ribonuclease Inhibitor 136 424 IPR032675 -
Rops7g01867 444 ProSiteProfiles TIR domain profile. 1 89 IPR000157 GO:0007165
Rops7g01867 444 SUPERFAMILY L domain-like 121 406 - -
Rops7g01867 444 Gene3D - 1 126 IPR035897 -
Rops7g01867 444 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 117 295 IPR044974 GO:0006952
Rops7g01867 444 Pfam TIR domain 2 98 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01867 Rops-Chr7 30010973 30014780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01867 114 403 WRKY Transcription Factor Family AT4G12020 39.088 1.73e-49 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01867 - - gmx:100815486 486.108