Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01845 ATGGCGTCAAAGCCTGTCAAGATGCCTGATTCACAAGAGATGAACAACAATTCACCAGAAGAACCTGTCACAACATACCATAGTTGTGCAAGTTCAGGAAATAATTCACCAACTCATCCCACAAAGGTGAATCAAGCAGAAAAAGATGCCAATACAATTGACCATTCAACAAGTGGTGGAGCTGGACATATGGATCATGTTTCTAAAACTGATGCAAAGTTGGCAAATAAATCCAAACCTCAGAAATTAGCAACACATTGCAGAAACATCTCTGATCATGGTACTCCACGCCACAGTCCAAGGGCAAAGAAGCCTTCAAATCCTGACCCTCCAACAGGAATTGCAAAGGGAATGTCTACTCATACAAAGAACACAAATCAAGCACCAGTTAGCGGCACTAGCTCCCGCAGTGACAGTATGGAGAGCACCAGTTCAACCCTTAGGCCTCACACTGGTGGTGATATAAGGTGGGATGCAATTAACATGGTTTCAAAAGGTGGACCTCTCAATCTTAGCCATTTCAGGCTTCTTAAGCGCATTGGTTATGGAGACATTGGAAGTGTATATCTTGTGGAACTTAAAGGAACTAAGGCTCACTTTGCCATGAAAGTTATGGACAAGGCTGCTCTTATAAGTAGAAATAAGCTTCTGCGAGCACAAACAGAAAAGGAGATTCTTGGACTTCTTGATCACCCCTTCTTGCCCACTTTATATTCTTACTTTGAAACTGATAAGTTTTACTGTTTGGTCATGGAATTCTGTAGTGGGGGTGATCTTCATTCTCTTCGACAGAAGCAACCAAACAAGTGTTTCACCGAAGAAGCTGCAAGGTTTTATGCTACAGAGGTTTTGTTAGCTCTTGAGTACCTGCACATGCTTGGCATTGTATACAGAGATTTAAAGCCAGAGAATCTTCTAGTCAGAGATGAAGGGCATATCATGCTCTCAGATTTTGATTTATCACTTCGCTGCTCTGTCTGTCCTACACTTGTAAAGTCTTCATCGGCCAGTGGAGGCAATGCTGGTGGTGGCGGCGGTGGTGGTGGTGGTGATTCTGGGGGTATGTTAGGTGATGATCAAGCAGTGCAAAGTGGTTCTCAGCCATCAAGTTTTTTCCCTCGCATTTTGCCTTCAAAGAAGAACCATGCTATAGACTTTTCCAAGTATGCTAGCAAAGACCAAGCACACCCAGCTGATAAGAAGATGGCAGATATTGCTAGGGATAAAAACAGCAAAAGTACTACTGAATCCTACGTAGATTTTGAGTATTTTTAG 1275 0.4275 MASKPVKMPDSQEMNNNSPEEPVTTYHSCASSGNNSPTHPTKVNQAEKDANTIDHSTSGGAGHMDHVSKTDAKLANKSKPQKLATHCRNISDHGTPRHSPRAKKPSNPDPPTGIAKGMSTHTKNTNQAPVSGTSSRSDSMESTSSTLRPHTGGDIRWDAINMVSKGGPLNLSHFRLLKRIGYGDIGSVYLVELKGTKAHFAMKVMDKAALISRNKLLRAQTEKEILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGDLHSLRQKQPNKCFTEEAARFYATEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVCPTLVKSSSASGGNAGGGGGGGGGDSGGMLGDDQAVQSGSQPSSFFPRILPSKKNHAIDFSKYASKDQAHPADKKMADIARDKNSKSTTESYVDFEYF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01845 424 FunFam serine/threonine-protein kinase D6PK-like 258 325 - -
Rops7g01845 424 MobiDBLite consensus disorder prediction 1 151 - -
Rops7g01845 424 Pfam Protein kinase domain 175 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01845 424 ProSiteProfiles Protein kinase domain profile. 174 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01845 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Rops7g01845 424 MobiDBLite consensus disorder prediction 391 416 - -
Rops7g01845 424 MobiDBLite consensus disorder prediction 359 374 - -
Rops7g01845 424 MobiDBLite consensus disorder prediction 9 58 - -
Rops7g01845 424 Gene3D Transferase(Phosphotransferase) domain 1 258 324 - -
Rops7g01845 424 FunFam Serine/threonine-protein kinase D6PK-like 172 257 - -
Rops7g01845 424 PANTHER FLIPPASE KINASE 1-RELATED 38 418 - -
Rops7g01845 424 MobiDBLite consensus disorder prediction 117 150 - -
Rops7g01845 424 MobiDBLite consensus disorder prediction 333 375 - -
Rops7g01845 424 Gene3D Phosphorylase Kinase; domain 1 172 257 - -
Rops7g01845 424 SMART serkin_6 174 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01845 424 SUPERFAMILY Protein kinase-like (PK-like) 163 324 IPR011009 -
Rops7g01845 424 MobiDBLite consensus disorder prediction 391 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01845 Rops-Chr7 29589049 29591389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01845 140 380 AGC Kinase Gene Family AT1G79250 75.720 1.16e-126 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops7g01845 Pkinase 2.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01845 - - tpra:123893855 503.827