Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01837 ATGGCAGCTTTGAGCTCAGCTAAGTTTCTTTTGCTTGTTGGAGAGTCATTCCCTATGAGAAGGGCTTTGGCCACTTCTAGGTTTGCTTGGTTTCATAGTAGTGTCCATTGTATGAGCCAAGTGGAACCCCACCATGGTTCCCTCACTCTTTCTAGCATTGGTTTGCAAAGTGAAGTTGAACCTAAAAACAGAAGCAAATCAAATAAGTTTAAGCCATTGGGTGAGGCTCTCAAGAGCAAAAGAAAGCCTTTTGGCATTAATGAGAAGAAGAAAGGAGTCGGGGTTAGAGAGAAGCAGCAAATAGAGTCTGCCCCTTTTGCTGCAAAGTCATTTTCAGAACTTGGCCTTCCACATTCGTTGATTGAGAGGCTAGAACATGAGGGTTTCACTGTTCCAACTGAAGTTCAGTCTGCTGCAGTTCCTAACGTTCTGAAGAACCATGATGTCATAATTCAGTCTTACACAGGTTCAGGGAAAACATTGGCTTATCTACTTCCTATACTATCGGTTATCGGGCCACTAAGGGACAAAAATCCTGAAGGGAATGGTGGTGGTGGTGGTGGTGGTGAGGATGGGAAGAAACTGGGAATAGAAGCAATGATTGTTGCTCCTTCTAGGGAGCTTGGAATGCAGATAGTGAGGGAGTTTGAAAAGATACTAGGAATGGATAATAAGAAAGTGGTTCAGCAGCTTGTGGGAGGTGCGAACCGAACTAGGCAGGAAGAAGCCCTCAAGAAGAATAAGCCTGCCATTGTTGTTGGCACACCTGGTAGGATAGCCGAGCTGAGTGCAGCCGGCAAACTTCGCACCCATGGCTGTCGTTTTTTGGTGTTAGATGAAGTTGATGAACTTCTGTCTTTCAATTTTCGGGAAGACATGCACCGGATATTGGAGCATGTAGGGAGGAGATCAGGTGCAGACCCAAGTTCAAATGCTAAAAGGGCTGAGCGTCAGTTAATTATGGTTTCTGCGACTGTGCCATTTTCTGTTGTAAGGGCAGCAAGGAGCTGGGGTTGTGACCCACTTCTTGTCCAAGCTAAGAAAGTTGTCCCGCTTGAAACCGTGTCTCCTTCTGAGCCTGTCAATTTGTTAAGGTCTTCACCCAGCTCAAGTCCTAACTCATCTACGCCATCTCAGGCAGCTGTAGAGAGTCTACCTCCAGCATTGAAACACTATTACTGTGTAGTAAGGTTGCAACACAAAGTTGATACATTGAGAAGGTGTATTCATGCACTGGATGCAAAATTTGTGATAGCTTTCATGAACCATACTAAGCAGCTAAAGGATGTTGTCTTCAAGTTGGAGGCCCGTGGGGGGATGAAAGCCGCGGAGTTACACGGGGATCTTGGGAAGCTTGCTAGGTCAACAACTCTGAAGAAATTCAAGAATGGTGAGGTGAGAGTTTTGGTGACAAATGAATTATCTGCAAGGGGTTTGGATGTCGCAGAATGTGATCTTGTGGTTAATCTGGACTTACCTACGGATTCAATTCACTATGCGCACCGAGCTGGCCGAACTGGTCGGCTTGGCAGGAATGGTACAGTGCTAACCATATGTGAAGAGTCAGAAGTATTTGTTGTGAAGAAATTGCAGAAGCAGCTTGGAATACCAATAGCATGCTGTGATTTTGCAGAGGGAAAGCTGCTTGTCACTGAAGAAGAGAAAACACTAAGCACTTCTACAAGATGA 1689 0.4535 MAALSSAKFLLLVGESFPMRRALATSRFAWFHSSVHCMSQVEPHHGSLTLSSIGLQSEVEPKNRSKSNKFKPLGEALKSKRKPFGINEKKKGVGVREKQQIESAPFAAKSFSELGLPHSLIERLEHEGFTVPTEVQSAAVPNVLKNHDVIIQSYTGSGKTLAYLLPILSVIGPLRDKNPEGNGGGGGGGEDGKKLGIEAMIVAPSRELGMQIVREFEKILGMDNKKVVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLRTHGCRFLVLDEVDELLSFNFREDMHRILEHVGRRSGADPSSNAKRAERQLIMVSATVPFSVVRAARSWGCDPLLVQAKKVVPLETVSPSEPVNLLRSSPSSSPNSSTPSQAAVESLPPALKHYYCVVRLQHKVDTLRRCIHALDAKFVIAFMNHTKQLKDVVFKLEARGGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTICEESEVFVVKKLQKQLGIPIACCDFAEGKLLVTEEEKTLSTSTR* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01837 562 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 530 IPR027417 -
Rops7g01837 562 CDD DEADc 120 345 - -
Rops7g01837 562 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 24 548 - -
Rops7g01837 562 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 109 137 IPR014014 GO:0003724
Rops7g01837 562 CDD SF2_C_DEAD 389 519 - -
Rops7g01837 562 Gene3D - 386 544 IPR027417 -
Rops7g01837 562 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 404 549 IPR001650 -
Rops7g01837 562 Pfam Helicase conserved C-terminal domain 404 510 IPR001650 -
Rops7g01837 562 SMART ultradead3 128 355 IPR014001 -
Rops7g01837 562 Pfam DEAD/DEAH box helicase 133 330 IPR011545 GO:0003676|GO:0005524
Rops7g01837 562 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 140 344 IPR014001 -
Rops7g01837 562 SMART helicmild6 428 510 IPR001650 -
Rops7g01837 562 MobiDBLite consensus disorder prediction 359 381 - -
Rops7g01837 562 Gene3D - 75 346 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01837 Rops-Chr7 29360634 29362964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01837 110 538 Eukaryotic Initiation Factors Gene Family AT3G19760 23.721 9.22e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01837 - - gmx:100812968 920.613