Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01834 ATGGCTGCTCAATTGCAAAAAACTGCAGATGAAATGAGTAGGAAGAAGCTTCATGGTGATTCTTCAACGGTTGAACTAAACAATTCCAATATGGTTCCTTCTAAGGGTGGTGCAAGTTCCCCATCTGATGCAAGATCATGTGTATCATCTATAGGAGATGCATCTGGTAGTGTTAAAGAAGGTGATGTGGATCATGAGTACCGTTCAACAGATCAGAATGTTCCTTATCCTTCTGGTGGCTATTATGGATACTACTATTCAGGTTATGGTGGTTTCTTTGGAGAGTCAGAAAACCAAGGATATTATGTTGGTGCTGATGCAATGGATCTTCAGTACCCTGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCATGCCAGAATTTCAGACTGGCTACTCTTCATACTTTCCTTTGAGTCCAACTGGTGTTGATGGACAGTATGTTGGCCATCAGGTCTACTCTCCTGGCTCCATCTTTCAACAACCAATTGGATCACCTGGTTATTTTTCAGCTTCTCTACCTTATGGGGAGTTACTTCCATCAACATACTCATGGGATTCGCATCTAACCGTGCAAGATAGTTCACAAGGAAATGGTTATAATGAGTTGGCCGGTAAGCCAAGTGGTAGATCTAATTTGTCTTCCCAGAGTCACACAGGTGGTATTGTGTCAAAGTCTGTAACCTCCCCTAACTTGAGCAAACCATCAGAAATGAAGGGTTCCAAACCATTATTAGAGGTCTCATCAACTCATGTTAAACGAAACCAGCCAAAACAAGCGAACAAGGCGCCGATTGGCTCAGTCCTCCATTCAGATGCTACGACGAAGGGTTGCTTGCCCATCTCCAAGTTTCCCACATACAATCAAGGAAAGAGTGGATTCCTCTATCCGAACAACTTACTTAATATGAAATCAAATACAAAGGGTTGGGTTAGTATTGATAAAAGCAAGGTTAATGATTCACTTAATGAGAAGAGTCAGGGTCCTAGAACAGCTAATGCAAAAGGTGCATTAATGTCTGGAGGTAATTCTGCAAGAGCCTTGGCCGTGGATGAGAGTGGAAATGTTAACAGCAAAATCAGGACAGATCAATATAACCTTCCTGATTTTCCAACCAAATATGATCATGCACTTTTCTTTGTCATCAAATCATACAGTGAAGATGATATCCATAAGAGCATCAAGTACAATGTGTGGGCCAGTACTCCTAATGGGAACAAGAGGCTGGATACTGCATTTCAGGATGCACAGAAACGAATGGAAGAAAAAGGAAGCAAGTGCCCTGTGTTCCTTTTCTTCTCGGTCAATGCTAGTGGTCAATTTTGTGGAGTAGCTGAGATGATTGGGCGGGTTGATTTCAACAAAAGTATGGATTTTTGGCAACAAGATAAATGGAATGGATATTTCCCTGTCAAATGGCACATTATAAAGGATGTTCCAAATCCTCAGTTACGGCATATAATCCTTGAGAATAATGATCACAAGCCAGTAACTAATAGTAGAGACACACAAGAGGTAACTTTTCCCCAAGGTATTGAAATGCTCAATATTTTTAAGAACTATGTGGCCAGAACATCTATATTGGATGACTTTGAATTTTATGAAAGCCGTCAGAAGGTCATGCAGGAGAAGAAAATAAGGCAATCTATGCCCCATACCAATAATATAAAGCACATAGATGAATTAACTACAGCACTTGGATCAGTAGACCTATCAGCTGTTAAGAACATCGAGGATCCAAAGTTGGTTGAGAAAGTGAATGACTAA 1770 0.4056 MAAQLQKTADEMSRKKLHGDSSTVELNNSNMVPSKGGASSPSDARSCVSSIGDASGSVKEGDVDHEYRSTDQNVPYPSGGYYGYYYSGYGGFFGESENQGYYVGADAMDLQYPVMQADNGSYVYLMPEFQTGYSSYFPLSPTGVDGQYVGHQVYSPGSIFQQPIGSPGYFSASLPYGELLPSTYSWDSHLTVQDSSQGNGYNELAGKPSGRSNLSSQSHTGGIVSKSVTSPNLSKPSEMKGSKPLLEVSSTHVKRNQPKQANKAPIGSVLHSDATTKGCLPISKFPTYNQGKSGFLYPNNLLNMKSNTKGWVSIDKSKVNDSLNEKSQGPRTANAKGALMSGGNSARALAVDESGNVNSKIRTDQYNLPDFPTKYDHALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDTAFQDAQKRMEEKGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDHKPVTNSRDTQEVTFPQGIEMLNIFKNYVARTSILDDFEFYESRQKVMQEKKIRQSMPHTNNIKHIDELTTALGSVDLSAVKNIEDPKLVEKVND* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01834 589 ProSiteProfiles YTH domain profile. 378 519 IPR007275 GO:0003723
Rops7g01834 589 CDD YTH 380 519 IPR007275 GO:0003723
Rops7g01834 589 MobiDBLite consensus disorder prediction 197 237 - -
Rops7g01834 589 MobiDBLite consensus disorder prediction 250 269 - -
Rops7g01834 589 MobiDBLite consensus disorder prediction 22 53 - -
Rops7g01834 589 FunFam YTH domain family 1, isoform CRA_a 357 534 - -
Rops7g01834 589 MobiDBLite consensus disorder prediction 320 340 - -
Rops7g01834 589 Pfam YT521-B-like domain 380 520 IPR007275 GO:0003723
Rops7g01834 589 MobiDBLite consensus disorder prediction 1 62 - -
Rops7g01834 589 Gene3D ph1033 like domains 355 534 - -
Rops7g01834 589 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 98 554 IPR045168 -
Rops7g01834 589 MobiDBLite consensus disorder prediction 197 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01834 Rops-Chr7 29279464 29284028 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01834 K20102 - gmx:100791190 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01834 7 29279464 29284028 Rops7g01834 7 29279464 29284028 ECH