Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01827 ATGCATACAATGGCTAAGAGAGCAGTGTTAATAGGATGCAACTATCCAAGAACAAAGGCTGAACTAAGAGGGTGCATTAATGATGTGTGGAGGATGCATAGCTGCCTCATTCATAGATATGGATTCTCAAAGGAAGATATCACTGTCCTCATTGATACTGATCATTCTTACATCCAACCTACTGGAAAGAACATAAGATCTTCCATGTCTAGGTTGATCCAGTCGGCTGAGCCCGGCGACATGCTCTTTGTTCACTACAGCGGCCATGGCACCCGCCTGCCGGCCGAGACCGGAGAGGAGGATGACACTGGCTATGATGAGTGCATTGTGCCTACCGATATGAATCTCATCACTGATGATGACTTCAAAGAATTTGTGGAGAAGGTCCCTAGAGGTTGTAAGATCACAATAGTATCAGATTCTTGTCACAGTGGAGGCTTAATTGAAGCAGCTAAGGAACAAATAGGAGAGAGCACCAAGGAAGGAGGCCAAAATTCAGACTCTAGCTTTGGATTTAAAAGTTTTCTTCACAGAACTGTGGAAGATACAGTTAAGTCTCGTGATATCGATATTCAATCAGAATTGTGCCACCATAAATACAAGAATGATATTGAAGAAAGACATGTTGAACTTCATCATGGGGACTACAGCTATGTGAAGAGTCGATCTTTGCCTCTTTCAACTCTTATTGACATACTCAAGCAGAAAACTGGAAAAGATGATATAGACATTGGGAAACTAAGACCTACACTATTTTATATCTTTGGGGAAGATGCCAGCCCTAAAGTAAAGAAGTTCATGAAGTTTGTCTTGAACCAACATGGAGGTGATGAAGGTGGAGGACATCATGGAATTTTGTGGCTGGTGGGTAATCTTGCTCAAGAGCTTCTCAAACATAAGCTGAATGAGACACACATGGGGAGTGAGCAAGAGGCATATGCTACAACTAGGCGCAATGTTGTAGATTGTGGAATTCTGTTGAGTGGTTGCCAGACTGACCAAACTTCTGCAGATGCAAGTCCTTATGGGAATTCAGACAAAGCTTATGGGGCTTTTAGCAATGCCATACAGGAAATAATTGAGGGGACTGATGGTACAGTTACAAACCAAGAGCTTGTTCTGAAAGCTAGGAAGAAACTTCGGAGGCAGGGTTTCACTCAGAAACCTGGACTCTATTGCAGTGACGACCATGTAGATGCTCCTTTTGTGTGCTGA 1215 0.4296 MHTMAKRAVLIGCNYPRTKAELRGCINDVWRMHSCLIHRYGFSKEDITVLIDTDHSYIQPTGKNIRSSMSRLIQSAEPGDMLFVHYSGHGTRLPAETGEEDDTGYDECIVPTDMNLITDDDFKEFVEKVPRGCKITIVSDSCHSGGLIEAAKEQIGESTKEGGQNSDSSFGFKSFLHRTVEDTVKSRDIDIQSELCHHKYKNDIEERHVELHHGDYSYVKSRSLPLSTLIDILKQKTGKDDIDIGKLRPTLFYIFGEDASPKVKKFMKFVLNQHGGDEGGGHHGILWLVGNLAQELLKHKLNETHMGSEQEAYATTRRNVVDCGILLSGCQTDQTSADASPYGNSDKAYGAFSNAIQEIIEGTDGTVTNQELVLKARKKLRRQGFTQKPGLYCSDDHVDAPFVC* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01827 404 SUPERFAMILY Caspase-like 6 132 IPR029030 -
Rops7g01827 404 Pfam Caspase domain 6 396 IPR011600 GO:0004197|GO:0006508
Rops7g01827 404 Gene3D - 293 403 - -
Rops7g01827 404 Gene3D - 1 218 - -
Rops7g01827 404 PANTHER METACASPASE-4 5 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01827 Rops-Chr7 29110174 29112783 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01827 - - gmx:100802658 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01827 7 29110174 29112783 Rops7g01827 7 29110174 29112783 ECH
Rops7g01827 7 29110174 29112783 Rops3g02305 3 46361650 46364126 PCT