Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01818 ATGAACACAACAATGGATCCAGAAGAATTTGCTCCACTTGCAAAAGATGAGAAGCATCTTAAGATCGGCAACCATGTCAATAAAGAGTTTAAAGAGTTTGAAAGATTGCAAGGTATTTTTGGCAAGGATCATGCAAATGGCCACGAGGCTGAGGTTGTTGTAGATGCAATGGAAAATGAAATTGGTGAGAATCACGCTAATGATGATGATGACTGGCTAGAACAACATGATAATTCTCCCACTTCTACTGAAAATACTACTGCTAGGATTGAACATACTTCTGTTGGACCACCTCCCAAGCGTCAACGCCTTGCTCAAGTAGCCAATAGGTTTCTTGAAAGTTTTGATGCCAAAATGGAGGTGGTGACAACTGATTTTGCAAAGGTTGTAGCCAAACTTCCATATCTTTCTAAAAGAGACTTGGTTGAAGAGCCAGTAGTGGCACCACGGTGGATTCCGGCGGTTCTTTCAGGTTTCTCTCAACTGGCAGCCTGTAACTTGTTAATGGCTCTGGTGCCACAGTTTGGGACTCAGGAACTTCCCATCTTGGTGTCTCCTTTGCCTTACTTAATGCCCAAGGCAACTGCTACTGTGCCCATTGGTATATTATCTATTCATGATCCAAATTTGACAAGTGAAGCCATTTTTGCTTATAGTAGTGACTATGCAGAAGGAAGTGATGATCTAAGAATTTTGAAGTTGGATGGTGATGGGAATTTGAGGATTTATAATTCTTATAAAGGAAGTGGAACTGCAATCAGGAGGTTGGCAACTTTGGAAGATCAATGTGAGGTTTATGGAGCTTATGGGAAACACAAGCTTTTGGTATATGAATACATGAAAAATGGGTCTTTTGATAAATTTCTTTTTGTGAAAGAAGAACAATCAGGAACATTGTTGGACAACATTGCACTTAGATCTGCAAGAGGAATCATGTACTTTCATGAAAAGTGTTGTCACTGCATAGTCCATTGTAATATAAAACCTGAAAGCATTCTTTTAGATGAGAATTTCAAGCCCAAGCTCTCAGACTTTTGCCTTGAAAAGCTCATGGGTCATGAGGAGCACAGAAGAAGAAACTTTGAAATATCAGAAGAGACCAATAATAAAGAGTTATCAGTTTGGGCTTATGAAGAGTTTGAGAAAGGTAATATCATGGGCATTGTTGACAAAAGACAATTTGTAAAACATGAAGTTAATTTTGATCACGTGAAAATATTGCTTCATGCAAGCTTTTGGTGCATTCAGAAACAACCATCTCAGAGGTTGGCTATAAGCAAAGTCTTGCAAATGCTAGAAGGTGTTACAAAATGTAAGAAGCCACCAGCACCAAAATCCTTGAATAAAGGACCATTCAGTCGAAATGGGGAATGCAATATCCCAACACCAGTACCAAATTATTTTTAG 1407 0.3895 MNTTMDPEEFAPLAKDEKHLKIGNHVNKEFKEFERLQGIFGKDHANGHEAEVVVDAMENEIGENHANDDDDWLEQHDNSPTSTENTTARIEHTSVGPPPKRQRLAQVANRFLESFDAKMEVVTTDFAKVVAKLPYLSKRDLVEEPVVAPRWIPAVLSGFSQLAACNLLMALVPQFGTQELPILVSPLPYLMPKATATVPIGILSIHDPNLTSEAIFAYSSDYAEGSDDLRILKLDGDGNLRIYNSYKGSGTAIRRLATLEDQCEVYGAYGKHKLLVYEYMKNGSFDKFLFVKEEQSGTLLDNIALRSARGIMYFHEKCCHCIVHCNIKPESILLDENFKPKLSDFCLEKLMGHEEHRRRNFEISEETNNKELSVWAYEEFEKGNIMGIVDKRQFVKHEVNFDHVKILLHASFWCIQKQPSQRLAISKVLQMLEGVTKCKKPPAPKSLNKGPFSRNGECNIPTPVPNYF* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01818 468 Gene3D Transferase(Phosphotransferase) domain 1 361 448 - -
Rops7g01818 468 ProSiteProfiles Protein kinase domain profile. 169 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01818 468 Pfam Protein kinase domain 270 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01818 468 MobiDBLite consensus disorder prediction 63 77 - -
Rops7g01818 468 PANTHER OS07G0415500 PROTEIN 358 444 - -
Rops7g01818 468 SUPERFAMILY Protein kinase-like (PK-like) 258 445 IPR011009 -
Rops7g01818 468 MobiDBLite consensus disorder prediction 63 101 - -
Rops7g01818 468 Gene3D Transferase(Phosphotransferase) domain 1 280 360 - -
Rops7g01818 468 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01818 Rops-Chr7 28832181 28836617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01818 217 444 Receptor kinase-like Gene Family AT5G38280 29.787 3.26e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops7g01818 Pkinase 2.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01818 - - cpap:110813280 221.476