Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01801 ATGGACTTCACTCCGCCACCTATCGAAGACGGTTTCACGGCGGAGAAGCTCTTCAACCAGGGCTTCTCTTACACCTACGACGACGTCATCTTCCTCCCTCACTACATCGACTTCGCCGCTGAAGAAGTTGACATCTCGACCCGCCTCACCCGTAACGTCCCCCTTTCCTCTCCATTCGTCGCCTCTCCCATGGACACCGTCTCTGAATCCGCCATGGCCGCCGCGATGGCCGCTCTCGGCGGCATCGCCATCGTCCACGCCAACACCACTCCCTCTTCACAAGCCAATTTCATCCGCGCAGCCAAGTCCCGCCGTGTCCCCATCCTCTCCGAACCCTCCTTCTGTTCTCCCAATACCGTCATTGAATCCGAAGAGGATTTCGCTGGCTCGCCGTTTCTTCTTGTAACCGACTCCGGCGGTCCCAAAGGGAAGCTCCTCGGGTATATCTCGAAGGTTAATTGGACGAATCAAAGTGACAAGGGCGTGAGAGTAGATAACTACATGGAGTCTCCGCCGGTGTCGGTGCCGTGGAATTTGGATTTAGCACGAATTGAGGAGGAAATGGAGAAGAAGAAGGCGAATTCCGTGGCTTTGACTAAGGATGAGGAGTTGGTTGATTTGGTGACAAAGGAGGATGTAGAGAGAGTGAAAGGCTATCCGAGATTGGCCACCGGAGGTTCGGTGGGGCCGGACGGGACATGGATGGTGGGGGCGGCGATTGGGACGAGGGAGCATGATAAGGAGAGGTTGGAGCATTTGGTGAAGGCTGGGGTGAATGCTGTGGTGTTGGACAGTTCTCAAGGGAACTCTGTTTATCAGTTGGAGATGATTAAGTATGTTAAGAAGGTGTATCCTGAATTGGATGTGATTGGTGGGAATGTGGTTACTATGTACCAGGCTGAGAATCTCATTCAAGCTGGTGTTGATGGATTGAGGGTTGGTATGGGGTCTGGTTCTATTTGCACCACTCAGGAGGTTTGTGCTGTTGGGCGTGGTCAGGCAACTGCTGTTTACAAGGTCTCATCCATTGCTTATAAAAGTGGTGTTCCTGTGATTGCTGATGGTGGCATCTCAAATTCTGGTCATATTGTTAAGGCTTTGTCATTGGGAGCATCCACTGTTATGATGGGAAGCTTCTTAGCTGGTAGTCTTGAGGCTCCTGGGGCTTATGCATATCAGAATGGTCAACGGGTCAAAAAGTATAGAGGAATGGGTTCCCTAGAAGCTATGACCAAAGGCAGTGATGCAAGATATTTGGGTGATACAGCAAAGCTAAAAATTGCTCAGGGAGTTGTTGGAGCCGTTAAAGATAAGGGTTCTGTCTTGAAGTTCATACCATACACCATGCAAGCAGTCAAGCAAGGGTTTCAAGATATTGGTGCTTCCTCTCTGCAGTCTGCTCATGACCTTCTAAGATCCAGGGTGTTAAGGCTAGAGGTCCGGACTGGAGCAGCACAGGTTGAAGGTGGAGTTCATGGGCTGGTTTCATATGAAAAGAAATACTACTGA 1509 0.5063 MDFTPPPIEDGFTAEKLFNQGFSYTYDDVIFLPHYIDFAAEEVDISTRLTRNVPLSSPFVASPMDTVSESAMAAAMAALGGIAIVHANTTPSSQANFIRAAKSRRVPILSEPSFCSPNTVIESEEDFAGSPFLLVTDSGGPKGKLLGYISKVNWTNQSDKGVRVDNYMESPPVSVPWNLDLARIEEEMEKKKANSVALTKDEELVDLVTKEDVERVKGYPRLATGGSVGPDGTWMVGAAIGTREHDKERLEHLVKAGVNAVVLDSSQGNSVYQLEMIKYVKKVYPELDVIGGNVVTMYQAENLIQAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVYKVSSIAYKSGVPVIADGGISNSGHIVKALSLGASTVMMGSFLAGSLEAPGAYAYQNGQRVKKYRGMGSLEAMTKGSDARYLGDTAKLKIAQGVVGAVKDKGSVLKFIPYTMQAVKQGFQDIGASSLQSAHDLLRSRVLRLEVRTGAAQVEGGVHGLVSYEKKYY* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01801 502 Pfam IMP dehydrogenase / GMP reductase domain 24 492 IPR001093 GO:0003824
Rops7g01801 502 NCBIfam IMP dehydrogenase 23 468 IPR005990 GO:0003938|GO:0006164
Rops7g01801 502 FunFam IMP dehydrogenase, putative 11 502 - -
Rops7g01801 502 SMART IMPDH_2 22 492 - -
Rops7g01801 502 SUPERFAMILY CBS-domain pair 132 215 IPR046342 -
Rops7g01801 502 Gene3D Aldolase class I 11 502 IPR013785 -
Rops7g01801 502 PIRSF IMPDH 11 502 IPR005990 GO:0003938|GO:0006164
Rops7g01801 502 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 8 502 IPR005990 GO:0003938|GO:0006164
Rops7g01801 502 ProSiteProfiles CBS domain profile. 168 224 IPR000644 -
Rops7g01801 502 CDD IMPDH 23 472 IPR001093 GO:0003824
Rops7g01801 502 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 13 502 - -
Rops7g01801 502 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 311 323 IPR015875 GO:0016491
Rops7g01801 502 Coils Coil 181 201 - -
Rops7g01801 502 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 23 500 IPR005990 GO:0003938|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01801 Rops-Chr7 28529767 28534950 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01801 K00088 - gmx:547628 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01801 7 28529767 28534950 Rops7g01801 7 28529767 28534950 ECH