Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01773 ATGGGGTCTGCTACAACTATTTGTATTGATAAAACAAGCACACTCACACTGAACCATATGAAGGTGACTAAGGTTTGGCTTGGCCTAGAACCTGTGGCAGAGGGTGCCTACTCATCAGTTGCACCAAATTCTCTTCAACTGATCAAGGAAGGAATGGCTCTCAACACAACTGGTGGTATGTACAAGTCTAAATCAGGTACTAAATTTGAGTTTTCAGTTAGTCCCACAGAAGCAAAAATCCTATCTTGGGTTGTATTGGAATTGAACATGGAGATGGAGCAACTGACCAAAAGTTGTTCCATCATTCAAGTTGAGACCTTCAACTCAAATTAA 333 0.4084 MGSATTICIDKTSTLTLNHMKVTKVWLGLEPVAEGAYSSVAPNSLQLIKEGMALNTTGGMYKSKSGTKFEFSVSPTEAKILSWVVLELNMEMEQLTKSCSIIQVETFNSN* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01773 110 Gene3D - 18 31 IPR023299 GO:0000166
Rops7g01773 110 PANTHER CATION TRANSPORTING ATPASE 1 109 - -
Rops7g01773 110 Gene3D - 5 17 IPR023214 -
Rops7g01773 110 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 14 109 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01773 Rops-Chr7 27864140 27864472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01773 1 109 Primary Pumps ATPases AT3G22910 55.046 8.88e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01773 K01537 - gmx:100793918 167.162