Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01772 ATGTCAATGATCTTGCTGTCAAACTTGGAGTGCATTAAGATACTTCTCAATACACCAAAAACCATTAGTGAATCCAATAAAAGATGGCACTCTGCATTCATGACCATCTATTGTCCTCGAGCCTTCATGTCTCATTTCACTCACAACAAAACCAAACCAAAAATCTCACCACCTTCTCCATCTTTAACCGTGCTTGATTTCAATCCACACCACTCATTTTCTATTGATCAAGCTAGTCTCACAGATATTGTCAAAGAGAAAGACATTGAGGGTCTTAAGAAATATGGTGGGGTTGAAGGGGTGGCTGCAGCACTTGAAACCAACGTTCAGTTTGGTATCAAAGGTGATGATGCTCAAGTCATTGCACGTAGACAGCAAGTGTTTGGTTCCAACACCACTAACAAACCTCCTTCAAAAGGGTTCCTTCATTTCGTGGTAGAAGCCTTTAAATATGTCACCATTCTCATCCTTTTGGTCTGTGCAGCTCTTTCACTAGGCTTTGGCATCAAGGAGCATGGACTCAAAGAAGGCAACTTCAGGCAGAATAAACAATTTGACAAGTTATCTCAAGTGAGCAATGATATACAAATTGATGTTATGAGAAGTGGACACTGCCAAAAGATCTCAATCTTTGAGATTGTGGTTGGTGATGCTGTTTGGTTGAAGATAGGATATCAAGTCCCAGCTGATGGATTATTCATAGATGAACATTCACTGAGAGTGGATGAATCAAGCATAATAGGGGAGATGGATCATGTGGCGATTAATAGAAACTATCACCCTTTCTTGTTATCAGGCACAAATATGGCTAATGGTTAG 819 0.4017 MSMILLSNLECIKILLNTPKTISESNKRWHSAFMTIYCPRAFMSHFTHNKTKPKISPPSPSLTVLDFNPHHSFSIDQASLTDIVKEKDIEGLKKYGGVEGVAAALETNVQFGIKGDDAQVIARRQQVFGSNTTNKPPSKGFLHFVVEAFKYVTILILLVCAALSLGFGIKEHGLKEGNFRQNKQFDKLSQVSNDIQIDVMRSGHCQKISIFEIVVGDAVWLKIGYQVPADGLFIDEHSLRVDESSIIGEMDHVAINRNYHPFLLSGTNMANG* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01772 272 Pfam E1-E2 ATPase 196 272 - -
Rops7g01772 272 SMART Cation_ATPase_N_a_2 94 169 IPR004014 -
Rops7g01772 272 Gene3D - 99 272 - -
Rops7g01772 272 SUPERFAMILY Calcium ATPase, transmembrane domain M 95 200 IPR023298 -
Rops7g01772 272 SUPERFAMILY Calcium ATPase, transduction domain A 196 272 IPR008250 -
Rops7g01772 272 PANTHER CATION TRANSPORTING ATPASE 56 272 - -
Rops7g01772 272 Pfam Cation transporter/ATPase, N-terminus 95 164 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01772 Rops-Chr7 27863045 27863926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01772 12 272 Primary Pumps ATPases AT3G22910 50.871 3.48e-83 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01772 K01537 - gmx:100793918 368.237