Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01760 ATGTCTGGACCGATCGATCCCATCAGCAAGGTTTGTACGTGGCGTGAGGCTTGGAGATTGAAGGTCAGGATCGTTAGGCTTTGGTGTGTTCCAATGTTTGGTAACACATCCCAGATAAATTCCATCCAGATGGTTTTCATGGATGAACATGGAGAAAGGATTCAAGCTTCAGTGAAGAATACACTGTTGTATAAGTTCAAGCATTTTCTCCATGAGGGATCTGTCTTTATCTTCACTCATTTCACTGTTATTCCCAATGTTGGGATGTACAGGGCAACTTCACATTCCTTTCGGTTTCTTTTTACATTTAAGACTAAGTACTCTGTGGCTGAGTCTTCTATTATTCCTTTGCTTGGATTACGTTTGGTTCCGTTTGATGATGTGCTTAAAAATGATCATGACTCTGATTATTTAATTGACGTTATTGGTGTGTTGACTTCTGTTTCCTCGGAGAAAGACATTGAAAGGGATGGGAAATTGTCCAAGATGATTGTTATAAAGTTGACTTCAGATAAGGGTAAATTGGAATGTGCTCTCTTCGGTGATTATGTTGGGACCTTGATGGATTTTGTTGCTGTGGGTGTCAATGAGCATCCAGTGGTGATTATTCAATTTGCGAAAGTAAAGTTGTTTAGAGGCAAGATAGTGCTTCAAAATGTCATGCATGCAACTCGGCTGTTGTTTAATCCTGATGTTGCAGAAGCTGTCGACTTTAGGAATGGGATTGCTGAACATGGAGTTATTGATGATTTTCCTCTTCTATCTGGGACTGATTCATTTGGTTTGTCTGCTGAGGATGAGTTTATGAAGTTGTACCCTAAGAAATCTTTGAAGCAGTTGCATGGTATTTCTGAGTATTTGCTGAAGAAAGAGAGTGGTGATTTATTGTTTGAAGAGAAGAAGTACTTGACTGGTGATGAAGTTCCTGAACTCTTTGATGGGTTGGTTGGGAAAAGATTGTTATTTAAAATTGAGGTTAACGTTGACAAATTTGTGCATTATGATGGTTCATTTCGTGTTAAGAAAGTCTGTGATGATGAATGTGTGATTTCTATGTATATGTTGAATGGTGCTGAGTGTACTCCATCAAAGTCAACTTTCAAGGTTCCTTTCACTTCCATTGATGATTCTACACCCAGTGGAGTGGGAGATGATGGGGATGTGTCTGAGCAATGTCAAACAGAAATTGATGTTACCCCTTTTGATGGTGGTAGTTCTACTTCTCATTCTGCTTCTGTGTCTGTCAAGCGGAAATTAGAGAATAGCTATGTGGTGAATGGTGATGATTCCAATGATATATTTCCCAAGGATCTTCAGAAAGATATGGAGGATGTTTGTGATGTTGACCAGTACCTTTCGTTGGACAAATTAGAGTGTTCAATTGATGATAATAAAAATAATGTTGGAGTTCCTAGCTTGAAGATGGTCAAGGTGGAATCTATGTCGCCATCGAGTAGTTAA 1461 0.3901 MSGPIDPISKVCTWREAWRLKVRIVRLWCVPMFGNTSQINSIQMVFMDEHGERIQASVKNTLLYKFKHFLHEGSVFIFTHFTVIPNVGMYRATSHSFRFLFTFKTKYSVAESSIIPLLGLRLVPFDDVLKNDHDSDYLIDVIGVLTSVSSEKDIERDGKLSKMIVIKLTSDKGKLECALFGDYVGTLMDFVAVGVNEHPVVIIQFAKVKLFRGKIVLQNVMHATRLLFNPDVAEAVDFRNGIAEHGVIDDFPLLSGTDSFGLSAEDEFMKLYPKKSLKQLHGISEYLLKKESGDLLFEEKKYLTGDEVPELFDGLVGKRLLFKIEVNVDKFVHYDGSFRVKKVCDDECVISMYMLNGAECTPSKSTFKVPFTSIDDSTPSGVGDDGDVSEQCQTEIDVTPFDGGSSTSHSASVSVKRKLENSYVVNGDDSNDIFPKDLQKDMEDVCDVDQYLSLDKLECSIDDNKNNVGVPSLKMVKVESMSPSSS* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01760 486 Pfam Domain of unknown function DUF223 44 138 IPR003871 -
Rops7g01760 486 CDD RPA1_DBD_A_like 19 106 - -
Rops7g01760 486 Gene3D - 4 111 IPR012340 -
Rops7g01760 486 CDD RPA1_DBD_B_like 140 239 - -
Rops7g01760 486 SUPERFAMILY Nucleic acid-binding proteins 5 109 IPR012340 -
Rops7g01760 486 SUPERFAMILY Nucleic acid-binding proteins 121 246 IPR012340 -
Rops7g01760 486 Gene3D - 115 249 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01760 Rops-Chr7 27673219 27675838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01760 7 239 Core DNA Replication Machinery Family AT2G06510 23.967 5.59e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01760 - - adu:110276578 270.781