Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01743 ATGGATCTAAGCAACTCTAAGTGTCTTAAGGAGACTCCAAGTTTTGAAGGGATGCTAAACCTTGAGCGTTTAGACCTTACAGGATGCACAAACTTATTACATGTCCATCCATCAATTGGACTTCTAACAAAACTTGCTTTCCTGACTTTGAGAAACTGTAGCAGTCTGGTGAGCCTTGACTTTGGCACTGCATCTAATTTAAGTTCTCTAAAAGTGCTACAACTCTCTGGTTGCTCAAAACTTCAAAATACCTCTCTAGTAGGGGCCTCAAATCTTGAGTACCTTGATATGGATCGATGTACAAATTTATTCACAATTCATGAATCAATTGGGACTCTTGCAAAGTTGAGATTCTTGAGTTTAAGGAACTGCACAAATCTTGTTAGCATACCCAACAACATCAATACCTTGACATCCGTTATAACTCTAGATTTATATGGTTGCTTTAGACTTCAGAATCTGCCTTTGACACAGGCTTTCAATTATTGTTGTCTGGAATCTTTGATTTTCATGGATGTAAGCTTTTGCAATCTACTTGAAGTACCTGAGGCAATTGGAGAGTTGAGGTGTTTAGAAAGAATAAATCTACAGGGAAACAACTTTGCTTTAATAACTTCTGCCATCAATATGCTTCATCGTTTAGCATATTTAAACTTGGCTCATTGCCATAAGCTTGAATCTTTGCCTGAGCTCCCTCCAGTAGATGCAACATCAGGGGGAAGGTATTTTAAAACAGTATCCGGATCTCGTGATCATAGGTCAGGCTTATATATTTTTGATTGTCCCAAAGTGGTTGATAAGTTGTCCATGGAGTACCATAAATATAGCGACCTTGATAAAATTCCATGGCTACAAAGACTACTTAAGCAACCCTGTTACTTTCGATGTGGCTTTGACATTGTTGTTCCTTGGGCATATAGAAATTATTATTCTTCATCGAACCCAATTATTCCAGCGTGGTTCGATCATCGATTTGATGGGGGTTCGATAATAAGGATAAAGAAGTACTCTGGCGAGAATGATGAGTGGATGGGCTTTGCCTTTTGTGTAGCATTTGAGGTAAACAATCGTCTTGCAATTGCTGGTTCTCCTAATCATTCACTACCACTTCCACATCCTTTTTATCTTTCTTTTGAAAGTGAACACACGGAGGAACGTTTTGATATGCCACTTAGTTTGAAACTGGACAAAATTGTTGGCTCAAAACATCTTTGGATAATTTATATATCTCGACAGCACTGTCATTTCATTAAAACAGGAGCGTGCATCACATTTAAAGCCTGCCCAGGTTTGATAATGAAGCAATGGGGGTTGTGCAAGGTAGATGCAAATGCATTGAACATGGAACGTAAAAGACAACGCCTTCTCTCATCACCTCATTTTAATAATACTGTCATTGAAAATGTAAAAGAAAGTAGCAGCAGCTTTGGGCCCAAAATCCAGCTTCCTTACAACTGGTTAATTTCTGATGAAGATGAAGTCGAGAATTATGAAGCCAAAGGAAAAGAAAATAATCTGTCTAATTTGGGCCTATAG 1536 0.3828 MDLSNSKCLKETPSFEGMLNLERLDLTGCTNLLHVHPSIGLLTKLAFLTLRNCSSLVSLDFGTASNLSSLKVLQLSGCSKLQNTSLVGASNLEYLDMDRCTNLFTIHESIGTLAKLRFLSLRNCTNLVSIPNNINTLTSVITLDLYGCFRLQNLPLTQAFNYCCLESLIFMDVSFCNLLEVPEAIGELRCLERINLQGNNFALITSAINMLHRLAYLNLAHCHKLESLPELPPVDATSGGRYFKTVSGSRDHRSGLYIFDCPKVVDKLSMEYHKYSDLDKIPWLQRLLKQPCYFRCGFDIVVPWAYRNYYSSSNPIIPAWFDHRFDGGSIIRIKKYSGENDEWMGFAFCVAFEVNNRLAIAGSPNHSLPLPHPFYLSFESEHTEERFDMPLSLKLDKIVGSKHLWIIYISRQHCHFIKTGACITFKACPGLIMKQWGLCKVDANALNMERKRQRLLSSPHFNNTVIENVKESSSSFGPKIQLPYNWLISDEDEVENYEAKGKENNLSNLGL* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01743 511 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 65 155 - -
Rops7g01743 511 SUPERFAMILY L domain-like 2 229 - -
Rops7g01743 511 Gene3D Ribonuclease Inhibitor 85 160 IPR032675 -
Rops7g01743 511 Gene3D Ribonuclease Inhibitor 1 84 IPR032675 -
Rops7g01743 511 Gene3D Ribonuclease Inhibitor 161 287 IPR032675 -
Rops7g01743 511 Pfam C-JID domain 317 439 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01743 Rops-Chr7 27304666 27306479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01743 1 194 WRKY Transcription Factor Family AT4G12020 37.113 6.74e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01743 - - var:108332841 545.814