Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01734 ATGAAAATGGCTTCAAACCTTTTGACAAAGGTGCTTTTGGGTCCTCGCTCGATTCACACTTCATCGTTCCTCACTCACCAACCTCGAATTCTCTCTTCTTTATTCAGTAAGCGGCTGTTTAGTATACGTGCTGTCCCAGCCTATACAGCCCAAAAAACCAAAACGACTGGTTGGACGCCTTGTATGGCTTGTTCCGTAGTTGGTAGAAGGGCTACATATGCAACACAACCTGTATCTACAAATGAGCCAGTTGTTTCTGTGGATTGGCTTTATGATAACCTGAAGGAGCCTGATATGAAGGTGCTGGATGCATCCTGGTACATGCCAGATGAGCAGAGGAATCCGATTCAAGAATATCAGGTTGCTCACATTCCTGGGGCCCTTTTCTTTGATGTAGATGGAATTTCAGATCGAAATACAAATTTGCCACACATGCTGCCATCAGAGGAAGCTTTTGCTGCTGCCGTTTCTGCTCTTGGCATACAGAACAAAGATGACGTGGTTGTTTATGATGGCAAAGGATTATTTAGTGCAGCTCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCATGACAGAGTATGGGTGTTAGAAGGCGGCCTGCCTAGATGGCGTGCATCAGGTTATGATGTTGAATCTAGTGCTTCGAGTGATGCTATTCTTAAAGCCAGTGCTGCAAGTGAGGCAATAGAGAAAGTATATCAGGGACAAGCAGTTAGCCCAATCACATTTCAGACTAAATTTCAGCCACATCTTGTTTGGACCCTTGATCAGGTAAAGAGAAATATAGAGGAAAAAACTCACCAACACATAGATGCTCGATCAAAGCCCAGGTTTGATGGAACTGCACCAGAGCCCCGAAAGGGAATCAGAGGTGGTCATGTACCTGGCAGTAAATGCATTCCTTTTGCCCAGTTGTTAGATGGTTCACAGACTTTGTTACCCGCAACTGAGTTGAAGAAGCGATTTGATCAAGAAGGCATCTCTTTGGAAAGCCCAGTTGTGACTTCGTGTGGAACTGGGGTTACTGCTTGCATTCTTGCTTTGGGTCTTCATCGTCTTGGAAAGAATGATGTTGCAGTTTATGATGGATCTTGGACTGAATGGGGAGCACAATCTGATACACCTGTTGAAACTTCACAACCACAATCAAGCTAG 1155 0.4485 MKMASNLLTKVLLGPRSIHTSSFLTHQPRILSSLFSKRLFSIRAVPAYTAQKTKTTGWTPCMACSVVGRRATYATQPVSTNEPVVSVDWLYDNLKEPDMKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGISDRNTNLPHMLPSEEAFAAAVSALGIQNKDDVVVYDGKGLFSAARVWWMFRVFGHDRVWVLEGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVSPITFQTKFQPHLVWTLDQVKRNIEEKTHQHIDARSKPRFDGTAPEPRKGIRGGHVPGSKCIPFAQLLDGSQTLLPATELKKRFDQEGISLESPVVTSCGTGVTACILALGLHRLGKNDVAVYDGSWTEWGAQSDTPVETSQPQSS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01734 384 Gene3D - 248 381 IPR036873 -
Rops7g01734 384 FunFam Sulfurtransferase 248 379 - -
Rops7g01734 384 Coils Coil 255 275 - -
Rops7g01734 384 ProSiteProfiles Rhodanese domain profile. 95 212 IPR001763 -
Rops7g01734 384 SMART rhod_4 253 374 IPR001763 -
Rops7g01734 384 SMART rhod_4 85 209 IPR001763 -
Rops7g01734 384 ProSitePatterns Rhodanese C-terminal signature. 358 368 IPR001307 GO:0004792
Rops7g01734 384 CDD TST_Repeat_2 254 370 - -
Rops7g01734 384 FunFam Sulfurtransferase 77 219 - -
Rops7g01734 384 ProSiteProfiles Rhodanese domain profile. 263 377 IPR001763 -
Rops7g01734 384 PANTHER THIOSULFATE SULFERTANSFERASE 79 381 IPR045078 GO:0016783
Rops7g01734 384 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 82 214 IPR036873 -
Rops7g01734 384 ProSitePatterns Rhodanese signature 1. 119 130 IPR001307 GO:0004792
Rops7g01734 384 Pfam Rhodanese-like domain 86 205 IPR001763 -
Rops7g01734 384 Pfam Rhodanese-like domain 255 370 IPR001763 -
Rops7g01734 384 MobiDBLite consensus disorder prediction 267 295 - -
Rops7g01734 384 CDD TST_Repeat_1 84 207 - -
Rops7g01734 384 Gene3D - 78 219 IPR036873 -
Rops7g01734 384 MobiDBLite consensus disorder prediction 267 286 - -
Rops7g01734 384 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 256 381 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01734 Rops-Chr7 27167589 27178311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01734 62 383 Sulfurtransferasese or Rhodanese AT1G79230 79.193 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01734 K01011 - gmx:100798053 682.559