Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01727 ATGGAGGAACTCATCGGAATGTTGTTAATGGGTGAACCTCTTTGGTTGACTACACTTGATGGCACCACCACTGTGCTCAATGAGGATGAATACATCAGATCCTTTCCCCGAGGAATTGGTCCAAAGGCTGCTGGCTTCAAATGTGAAGCTTCACGAGAAACTGCTGTTGTTATCATGAACCATGTTAACCTTGTCGAGATTCTCATGGATGTGAACCAATGGTCCACAGTGTTCTCTGGTATTGTCTCAAGAGCAATGACCTTGGAAGTGCTATCAACTGGGGTGGCAGGGAACTACAATGGTGCCTTGCATGTGATGACAGCAGAATTACAAGTACCTTCACCACTTGTGCCAACTCGTGAGAGTTATTTTGTAAGGTATTGTAAGCAGCACGGTGATGGGACTTGGGCAGTAGTGGATGTGTCTTTGGATAATTTGCGCCCTAGTCCTTAG 453 0.4592 MEELIGMLLMGEPLWLTTLDGTTTVLNEDEYIRSFPRGIGPKAAGFKCEASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALHVMTAELQVPSPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSP* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01727 150 SUPERFAMILY Bet v1-like 3 144 - -
Rops7g01727 150 ProSiteProfiles START domain profile. 1 150 IPR002913 GO:0008289
Rops7g01727 150 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 149 IPR042160 -
Rops7g01727 150 CDD START_ArGLABRA2_like 1 150 - -
Rops7g01727 150 Pfam START domain 1 149 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01727 Rops-Chr7 27012653 27013314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01727 1 149 Homeobox Transcription Factor Family AT4G04890 78.523 1.63e-80 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01727 K09338 - gmx:100790101 289.656