Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01712 ATGGTCTCTGCCACTGCCACAACACTCTTGTTTTCCACCGATCACCATATTCCCCTTTCTTCTTCTTCGACTATTCCCAAATCCTTTACTGGTCTCTGCAAGCCCTTTCATTCAAGGGTTCCCACTTCTGGTCCCTTCCATTGCACTCGACCAACCTTCTTTGTCAGGGCTACTGTTATAAAGTGGCGATGTCCAAAGCAAATTCTCCCTCCCAATGGCAACACCGGTTTTCAAACAAAAGTCTTGTATCTAGAGTCTATTGGTATTGACTCATTCTCACTCATTGAAAATCATCCGATGCTGATCACTGCCTCACTTGCTGACATCAAATCCACTGTGGAATACATTACCTCCATGGATTTCTCAGCAATTGAGTTTCGGCGTATAGTTGGCATGTGCCCGGAGATTCTGACTACCAAAGTTTCAGACATCATACCTGTCTTCACCTTCCTTCACCGTGAAGTTCATGTAGATGGTTCAGATATTAAGCATGTCATAAATCGTCGTCCCAGGTTGCTTGTCTGCAGTGTTAACAAGCAACTTCGTCCTACCCTTTACTTCCTCCAAAGTATTGGTATAGAAGAGGTAAACAAGCACACCCATTTGCTATCATGTAGTGTGGAAGAAAAGTTTATACCCAGGATTGATTACTTTGAGAATATTGGGTTTTCTCGCCGTGATGCAACTTCAATGTTTCGAAGATTTCCTCAGCTGTTTTGTTATAGTATTAAGAATAATTTGGAGCCTAAATACAATTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGCTGAAAGAGTTTCCACAGTATTTCTCATTTAGCTTAGAGAATAGAATTAAGCCTAGGCATAAACGCTGTGTAGAAATGGGGGTGTGTTTTCCTCTCCCTGTGTTATTAAAGACAAGTGAAGTGAGATTTAAAAATAGATTTGATGTATGTGTAAATTCTTCAACACCCTTGAAAACATCTCCTTTGTGGTGTGCTGGTTGTCACGTTGATTAA 1005 0.4119 MVSATATTLLFSTDHHIPLSSSSTIPKSFTGLCKPFHSRVPTSGPFHCTRPTFFVRATVIKWRCPKQILPPNGNTGFQTKVLYLESIGIDSFSLIENHPMLITASLADIKSTVEYITSMDFSAIEFRRIVGMCPEILTTKVSDIIPVFTFLHREVHVDGSDIKHVINRRPRLLVCSVNKQLRPTLYFLQSIGIEEVNKHTHLLSCSVEEKFIPRIDYFENIGFSRRDATSMFRRFPQLFCYSIKNNLEPKYNYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHKRCVEMGVCFPLPVLLKTSEVRFKNRFDVCVNSSTPLKTSPLWCAGCHVD* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01712 334 Gene3D Transcription termination factor 3, mitochondrial 141 315 IPR038538 -
Rops7g01712 334 Pfam mTERF 83 194 IPR003690 GO:0003690|GO:0006355
Rops7g01712 334 Pfam mTERF 197 308 IPR003690 GO:0003690|GO:0006355
Rops7g01712 334 FunFam Transcription termination factor MTEF1, chloroplastic 151 315 - -
Rops7g01712 334 PANTHER CGI-12 PROTEIN-RELATED 93 311 IPR003690 GO:0003690|GO:0006355
Rops7g01712 334 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Rops7g01712 334 SMART mt_12 92 122 IPR003690 GO:0003690|GO:0006355
Rops7g01712 334 SMART mt_12 163 194 IPR003690 GO:0003690|GO:0006355
Rops7g01712 334 SMART mt_12 262 293 IPR003690 GO:0003690|GO:0006355
Rops7g01712 334 SMART mt_12 229 261 IPR003690 GO:0003690|GO:0006355
Rops7g01712 334 SMART mt_12 195 224 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops7g01712 mTERF 6.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01712 K15032 - gmx:100794678 583.178